RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 ERVK13-1Q9NX77 482 aa5.68□□□□□ -1.5
SEMA3A-202ENST00000420047 WDR7Q9Y4E6 1490 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 F6X3S4 739 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 PRICKLE3O43900 615 aaPredicted RBP5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 ZNF205O95201 554 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 NCKAP1LP55160 1127 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 CWF19L2Q2TBE0 894 aaKnown RBP5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 ZC3H14Q6PJT7 736 aaKnown RBP5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 HHIPL2Q6UWX4 724 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 FAM196AQ6ZSG2 479 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 NUP43Q8NFH3 380 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 CRELD1Q96HD1 420 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 GPR20Q99678 358 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 PALD1Q9ULE6 856 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 GLI2P10070 1586 aa5.67□□□□□ -1.5
SEMA3A-202ENST00000420047 ANKRD33BA6NCL7 494 aa5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 CLEC3AO75596 197 aa5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 INSRRP14616 1297 aa5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 XPCQ01831 940 aaPredicted RBP5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 PLEKHN1Q494U1 663 aaPredicted RBP5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 CDADC1Q9BWV3 514 aa5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 LRRC3Q9BY71 257 aa5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 PRR13Q9NZ81 148 aa5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 MAP3K4Q9Y6R4 1608 aa5.66□□□□□ -1.5
SEMA3A-202ENST00000420047 PATL2C9JE40 543 aaKnown RBP5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 K7ESM1 405 aa5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 VAV1P15498 845 aa5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 GARTP22102 1010 aa5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 CEBPAP49715 358 aaPredicted RBP5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 FAM160A1Q05DH4 1040 aa5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 PUM1Q14671 1186 aaKnown RBP eCLIP5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 UBXN11Q5T124 520 aa5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 FBXO27Q8NI29 283 aa5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 PCDHB14Q9Y5E9 798 aa5.65□□□□□ -1.5
SEMA3A-202ENST00000420047 ADGRL1O94910 1474 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 GOLGA3Q08378 1498 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 PLEKHD1A6NEE1 506 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 MSL3P1P0C860 447 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 PAQR3Q6TCH7 311 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 EHMT1Q9H9B1 1298 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 KCNQ5Q9NR82 932 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 USP40Q9NVE5 1235 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 IMPACTQ9P2X3 320 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 PCDHB12Q9Y5F1 795 aa5.64□□□□□ -1.51
SEMA3A-202ENST00000420047 A0A1W2PQ27 194 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 A0A1W2PQ64 194 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 A0A1W2PQC6 194 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 A0A1W2PQD8 194 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 LOC105371045A0A1W2PR82 267 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 MINDY4BA8MYZ0 360 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 SRGAP3O43295 1099 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 CYBBP04839 570 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 CTSKP43235 329 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 LIMS1P48059 325 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 ZNF200P98182 395 aaPredicted RBP5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 ZNF827Q17R98 1081 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 VWA3BQ502W6 1294 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 OVOS1Q6IE37 1185 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 LIPIQ6XZB0 460 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 TMEM52Q8NDY8 209 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 ATG4CQ96DT6 458 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 JMJD8Q96S16 334 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 BRMS1Q9HCU9 246 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 SUSD2Q9UGT4 822 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 MINPP1Q9UNW1 487 aa5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 NUP153P49790 1475 aaKnown RBP5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 CDK13Q14004 1512 aaKnown RBP5.63□□□□□ -1.51
SEMA3A-202ENST00000420047 SH3D21A4FU49 640 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 TLR3O15455 904 aaKnown RBP5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 FBLN1P23142 703 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 POLR2BP30876 1174 aaKnown RBP5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 MAGEA10P43363 369 aaPredicted RBP5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 FOXO4P98177 505 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 MVKQ03426 396 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 HLA-DQA1Q5Y7H0 255 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 NLRC3Q7RTR2 1065 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 SAPCD2Q86UD0 394 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 FNIP1Q8TF40 1166 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 RNF38Q9H0F5 515 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 AP5S1Q9NUS5 200 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 GFOD1Q9NXC2 390 aa5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 ARID4BQ4LE39 1312 aaPredicted RBP5.62□□□□□ -1.51
SEMA3A-202ENST00000420047 MEIS1O00470 390 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 SORBS3O60504 671 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 GREM1O60565 184 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 GSNP06396 782 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 ITGAEP38570 1179 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 HTRA3P83110 453 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 AUHQ13825 339 aaKnown RBP5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 SAMD9Q5K651 1589 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 MAGI3Q5TCQ9 1506 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 NT5DC1Q5TFE4 455 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 FBXL19Q6PCT2 694 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 RAPGEF6Q8TEU7 1601 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 ZNF512BQ96KM6 892 aaPredicted RBP5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 MKRN2Q9H000 416 aaKnown RBP5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 FBXL21Q9UKT6 434 aa5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 SUPT16HQ9Y5B9 1047 aaKnown RBP5.61□□□□□ -1.51
SEMA3A-202ENST00000420047 TEX14Q8IWB6 1497 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms