RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CABYRO75952 493 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 FGBP02675 491 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 IGFBP4P22692 258 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 TIE1P35590 1138 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 BEX3Q00994 111 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 CNTN2Q02246 1040 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 ZSCAN25Q6NSZ9 544 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 TLK2Q86UE8 772 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 MKL1Q969V6 931 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 VWCEQ96DN2 955 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 NOC4LQ9BVI4 516 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 WNT8AQ9H1J5 351 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 MKNK2Q9HBH9 465 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 NCOR1O75376 2440 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 BDP1A6H8Y1 2624 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 TNFAIP2Q03169 654 aa12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 ITGA7Q13683 1181 aa12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 OTOP2Q7RTS6 562 aa12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 CEP95Q96GE4 821 aa12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 SEZ6LQ9BYH1 1024 aa12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 ACAD9Q9H845 621 aa12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 EPB41L4AQ9HCS5 686 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 A1CFQ9NQ94 594 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 MTMR4Q9NYA4 1195 aa12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 CTDP1Q9Y5B0 961 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-202ENST00000420009 ZNF536O15090 1300 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 MYH4Q9Y623 1939 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 B4GALT4O60513 344 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 FDX1P10109 184 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 BMP1P13497 986 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 PTGS1P23219 599 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 CCL23P55773 120 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 PPP2R2DQ66LE6 453 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 STK11IPQ8N1F8 1099 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 IL27Q8NEV9 243 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 NECAB3Q96P71 396 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 BCL11AQ9H165 835 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 TRPV6Q9H1D0 765 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 PCDHA11Q9Y5I1 949 aa12.18□□□□□ -0.46
TNFAIP3-202ENST00000420009 TRANK1O15050 2925 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 ASB14A6NK59 587 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 MINDY4BA8MYZ0 360 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 PRDM1O75626 825 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 TTLL1O95922 423 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 BMP3P12645 472 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 MYOGP15173 224 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 SMPD1P17405 629 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 RABGGTBP53611 331 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 SLFN13Q68D06 897 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 APPBP2Q92624 585 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 OSBP2Q969R2 916 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 RNF146Q9NTX7 359 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 SLC4A7Q9Y6M7 1214 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 MYO9BQ13459 2157 aa12.17□□□□□ -0.46
TNFAIP3-202ENST00000420009 MAP3K13O43283 966 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 POU3F3P20264 500 aaPredicted RBP12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 STAT2P52630 851 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 HNRNPUQ00839 825 aaKnown RBP eCLIP12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 TFF2Q03403 129 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 TKFCQ3LXA3 575 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 TAPT1Q6NXT6 567 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 FBXO16Q8IX29 292 aaPredicted RBP12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 KBTBD3Q8NAB2 608 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 FAM122AQ96E09 287 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 GMCL1Q96IK5 515 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 AP5M1Q9H0R1 490 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 ALDH8A1Q9H2A2 487 aaPredicted RBP12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 ZNF287Q9HBT7 754 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 DDX19BQ9UMR2 479 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 Q9Y3F1 56 aa12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 DDX49Q9Y6V7 483 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-202ENST00000420009 TMEM232C9JQI7 657 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 ERC2O15083 957 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 DYNC1LI2O43237 492 aaPredicted RBP12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 GPAA1O43292 621 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 ZEB2O60315 1214 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 PFKMP08237 780 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 MS4A1P11836 297 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 TDO2P48775 406 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 PSMC6P62333 389 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 TMEM63BQ5T3F8 832 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 IQSEC1Q6DN90 963 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 FAM160B2Q86V87 743 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 RPUSD2Q8IZ73 545 aaKnown RBP12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 ZNF444Q8N0Y2 327 aaPredicted RBP12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms