RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ZNF713Q8N859 430 aaPredicted RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 CTTNBP2NLQ9P2B4 639 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 ZNRF3Q9ULT6 936 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 RABGAP1Q9Y3P9 1069 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 CDC37L1Q7L3B6 337 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 APOBEC3FQ8IUX4 373 aaKnown RBP9.33□□□□□ -0.92
UBR4-206ENST00000419533 ZNF34Q8IZ26 560 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 RNF169Q8NCN4 708 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 SLC17A8Q8NDX2 589 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 TRERF1Q96PN7 1200 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 ADCY9O60503 1353 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 ECE2O60344 883 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 TECP42680 631 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 POLGP54098 1239 aaPredicted RBP9.33□□□□□ -0.92
UBR4-206ENST00000419533 FANCCQ00597 558 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 DMP1Q13316 513 aaPredicted RBP9.33□□□□□ -0.92
UBR4-206ENST00000419533 ZMYM1Q5SVZ6 1142 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 BCL9LQ86UU0 1499 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 SEC62Q99442 399 aaKnown RBP9.33□□□□□ -0.92
UBR4-206ENST00000419533 FHDC1Q9C0D6 1143 aaPredicted RBP9.33□□□□□ -0.92
UBR4-206ENST00000419533 CEMIPQ8WUJ3 1361 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 MXRA7P84157 204 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 ZNF365Q70YC5 407 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 CCDC25Q86WR0 208 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 EXOC8Q8IYI6 725 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 MYOCDQ8IZQ8 938 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 CAMKK2Q96RR4 588 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 SERPINB13Q9UIV8 391 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 TUBB2AQ13885 445 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 SFMBT2Q5VUG0 894 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 SYCE1Q8N0S2 351 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 IFT81Q8WYA0 676 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 TUBB2BQ9BVA1 445 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 LARSQ9P2J5 1176 aaKnown RBP9.33□□□□□ -0.92
UBR4-206ENST00000419533 PI4KBQ9UBF8 816 aa9.33□□□□□ -0.92
UBR4-206ENST00000419533 NBPF26B4DH59 902 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 K7ENM7 598 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 YY1P25490 414 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 PTH1RQ03431 593 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 ME3Q16798 604 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 NBPF10Q6P3W6 841 aaKnown RBP9.32□□□□□ -0.92
UBR4-206ENST00000419533 NBPF15Q8N660 670 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 MED10Q9BTT4 135 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 SUGCTQ9HAC7 445 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 COL4A3BPQ9Y5P4 624 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
UBR4-206ENST00000419533 KLHL30Q0D2K2 578 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 PPP2R5AQ15172 486 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 AOC3Q16853 763 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 TTLL11Q8NHH1 800 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 GPKOWQ92917 476 aaPredicted RBP eCLIP9.32□□□□□ -0.926e-7■■■■□ 20.2
UBR4-206ENST00000419533 ATP6V0A1Q93050 837 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 BLZF1Q9H2G9 400 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 DBNLQ9UJU6 430 aaKnown RBP9.32□□□□□ -0.92
UBR4-206ENST00000419533 ATP5DP30049 168 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 NT5C2P49902 561 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 TMTC1Q8IUR5 882 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 GIMAP7Q8NHV1 300 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 CDHR1Q96JP9 859 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 SELENOSQ9BQE4 189 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 TAB2Q9NYJ8 693 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 SERTAD1Q9UHV2 236 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 XPOTO43592 962 aaKnown RBP9.32□□□□□ -0.92
UBR4-206ENST00000419533 XRCC5P13010 732 aaKnown RBP9.32□□□□□ -0.92
UBR4-206ENST00000419533 C9orf131Q5VYM1 1079 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 ADALQ6DHV7 355 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 CMTR1Q8N1G2 835 aaKnown RBP9.32□□□□□ -0.92
UBR4-206ENST00000419533 MIS12Q9H081 205 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 PRKAG2Q9UGJ0 569 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 RGS12O14924 1447 aa9.32□□□□□ -0.92
UBR4-206ENST00000419533 LAD1O00515 517 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 FAM178BQ8IXR5 827 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 FBF1Q8TES7 1133 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 PANK4Q9NVE7 773 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 STAP2Q9UGK3 403 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 NFE2L3Q9Y4A8 694 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 BMP3P12645 472 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 CCND2P30279 289 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 ADD2P35612 726 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 CYP2J2P51589 502 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 FAM173BQ6P4H8 233 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 TMED8Q6PL24 325 aaPredicted RBP9.31□□□□□ -0.92
UBR4-206ENST00000419533 MAIP1Q8WWC4 291 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 SECISBP2LQ93073 1101 aaKnown RBP9.31□□□□□ -0.92
UBR4-206ENST00000419533 SORBS3O60504 671 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 RPS12P25398 132 aaKnown RBP9.31□□□□□ -0.92
UBR4-206ENST00000419533 LONP1P36776 959 aaKnown RBP9.31□□□□□ -0.92
UBR4-206ENST00000419533 GABPAQ06546 454 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 SF3B3Q15393 1217 aaKnown RBP9.31□□□□□ -0.92
UBR4-206ENST00000419533 MIS18BP1Q6P0N0 1132 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 PPP1R21Q6ZMI0 780 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 ARFGAP2Q8N6H7 521 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 SMC6Q96SB8 1091 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 NAPGQ99747 312 aaPredicted RBP9.31□□□□□ -0.92
UBR4-206ENST00000419533 MAGEF1Q9HAY2 307 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 PNMA3Q9UL41 463 aa9.31□□□□□ -0.92
UBR4-206ENST00000419533 MMP14P50281 582 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms