RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 CHURC1Q8WUH1 139 aa7.9□□□□□ -1.14
LINC02539-202ENST00000419220 MAP4K1Q92918 833 aa7.9□□□□□ -1.14
LINC02539-202ENST00000419220 GLMNQ92990 594 aa7.9□□□□□ -1.14
LINC02539-202ENST00000419220 CCDC97Q96F63 343 aaPredicted RBP7.9□□□□□ -1.14
LINC02539-202ENST00000419220 DYNLL2Q96FJ2 89 aa7.9□□□□□ -1.14
LINC02539-202ENST00000419220 MTA3Q9BTC8 594 aa7.9□□□□□ -1.14
LINC02539-202ENST00000419220 PRDM10Q9NQV6 1147 aa7.9□□□□□ -1.14
LINC02539-202ENST00000419220 TCP11L1Q9NUJ3 509 aa7.9□□□□□ -1.14
LINC02539-202ENST00000419220 CLIP2Q9UDT6 1046 aa7.9□□□□□ -1.14
LINC02539-202ENST00000419220 ISY1Q9ULR0 285 aaKnown RBP7.9□□□□□ -1.14
LINC02539-202ENST00000419220 STX8Q9UNK0 236 aa7.9□□□□□ -1.14
LINC02539-202ENST00000419220 CEP350Q5VT06 3117 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 H3BM21 787 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 WDR46O15213 610 aaKnown RBP7.89□□□□□ -1.15
LINC02539-202ENST00000419220 TLR2O60603 784 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 FGRP09769 529 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 CYP2D6P10635 497 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 RASA1P20936 1047 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 HOXA7P31268 230 aaPredicted RBP7.89□□□□□ -1.15
LINC02539-202ENST00000419220 COPB2P35606 906 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 SP3Q02447 781 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 TRAF1Q13077 416 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 IKQ13123 557 aaPredicted RBP7.89□□□□□ -1.15
LINC02539-202ENST00000419220 COG2Q14746 738 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 DGKHQ86XP1 1220 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 KCTD17Q8N5Z5 321 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 MB21D1Q8N884 522 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 MKL1Q969V6 931 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 C12orf42Q96LP6 360 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 TANGO6Q9C0B7 1094 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 KAT14Q9H8E8 782 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 EPB41L4AQ9HCS5 686 aaPredicted RBP7.89□□□□□ -1.15
LINC02539-202ENST00000419220 TMX2Q9Y320 296 aa7.89□□□□□ -1.15
LINC02539-202ENST00000419220 OTOFQ9HC10 1997 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 CYP2D7A0A087X1C5 515 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 BTBD19C9JJ37 291 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 ZBED4O75132 1171 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 PRDM1O75626 825 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 CHGBP05060 677 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 TOP1P11387 765 aaKnown RBP7.88□□□□□ -1.15
LINC02539-202ENST00000419220 EEF2P13639 858 aaKnown RBP7.88□□□□□ -1.15
LINC02539-202ENST00000419220 AKR1B1P15121 316 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 MCM5P33992 734 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 SLC1A4P43007 532 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 PRMT2P55345 433 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 HAND2P61296 217 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 MSS51Q4VC12 460 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 VPS53Q5VIR6 699 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 FAM160B2Q86V87 743 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 BRI3BPQ8WY22 251 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 CHMP4CQ96CF2 233 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 CALR3Q96L12 384 aaKnown RBP7.88□□□□□ -1.15
LINC02539-202ENST00000419220 DNAJC18Q9H819 358 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 VCPKMTQ9H867 229 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 SLC5A4Q9NY91 659 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 MTMR4Q9NYA4 1195 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 FEM1BQ9UK73 627 aa7.88□□□□□ -1.15
LINC02539-202ENST00000419220 RBM8AQ9Y5S9 174 aaKnown RBP7.88□□□□□ -1.15
LINC02539-202ENST00000419220 PLIN4Q96Q06 1357 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 F5H6K3 240 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 GPR25O00155 361 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 FLOT1O75955 427 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 TBC1D8O95759 1140 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 F12P00748 615 aaPredicted RBP7.87□□□□□ -1.15
LINC02539-202ENST00000419220 CALM1P0DP23 149 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 CALM2P0DP24 149 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 CALM3P0DP25 149 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 KLRC3Q07444 240 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 ZYXQ15942 572 aaKnown RBP7.87□□□□□ -1.15
LINC02539-202ENST00000419220 PTPRNQ16849 979 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 FAM47AQ5JRC9 791 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 GPATCH4Q5T3I0 446 aaKnown RBP7.87□□□□□ -1.15
LINC02539-202ENST00000419220 IFIT1BQ5T764 474 aaKnown RBP7.87□□□□□ -1.15
LINC02539-202ENST00000419220 CATSPERGQ6ZRH7 1159 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 CATIPQ7Z7H3 387 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 NBPF11Q86T75 865 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 PRPF38AQ8NAV1 312 aaKnown RBP7.87□□□□□ -1.15
LINC02539-202ENST00000419220 SLC44A5Q8NCS7 719 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 GMCL1P1Q8NEA9 526 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 GPRC5AQ8NFJ5 357 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 DCAF4Q8WV16 495 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 COA7Q96BR5 231 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 TMEM87BQ96K49 555 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 ZSCAN10Q96SZ4 725 aaPredicted RBP7.87□□□□□ -1.15
LINC02539-202ENST00000419220 NUDT12Q9BQG2 462 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 RABGAP1Q9Y3P9 1069 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 IVNS1ABPQ9Y6Y0 642 aa7.87□□□□□ -1.15
LINC02539-202ENST00000419220 DDX60LQ5H9U9 1706 aaKnown RBP7.86□□□□□ -1.15
LINC02539-202ENST00000419220 MYH4Q9Y623 1939 aa7.86□□□□□ -1.15
LINC02539-202ENST00000419220 THSD7BQ9C0I4 1608 aa7.86□□□□□ -1.15
LINC02539-202ENST00000419220 CCDC69A6NI79 296 aa7.86□□□□□ -1.15
LINC02539-202ENST00000419220 E7EWF7 191 aa7.86□□□□□ -1.15
LINC02539-202ENST00000419220 J3QL48 77 aa7.86□□□□□ -1.15
LINC02539-202ENST00000419220 IGF2BP3O00425 579 aaKnown RBP eCLIP7.86□□□□□ -1.15
LINC02539-202ENST00000419220 IFIT3O14879 490 aaKnown RBP7.86□□□□□ -1.15
LINC02539-202ENST00000419220 DXOO77932 396 aaKnown RBP7.86□□□□□ -1.15
LINC02539-202ENST00000419220 SLC25A27O95847 323 aa7.86□□□□□ -1.15
LINC02539-202ENST00000419220 CCNYL3P0C7X3 344 aa7.86□□□□□ -1.15
LINC02539-202ENST00000419220 BMP3P12645 472 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms