RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 XAGE3Q8WTP9 111 aa7.74□□□□□ -1.17
NIFKP3-201ENST00000417799 CCDC74BQ96LY2 380 aa7.74□□□□□ -1.17
NIFKP3-201ENST00000417799 KIF2CQ99661 725 aa7.74□□□□□ -1.17
NIFKP3-201ENST00000417799 KCNF1Q9H3M0 494 aa7.74□□□□□ -1.17
NIFKP3-201ENST00000417799 ZSWIM4Q9H7M6 989 aa7.74□□□□□ -1.17
NIFKP3-201ENST00000417799 POLKQ9UBT6 870 aa7.74□□□□□ -1.17
NIFKP3-201ENST00000417799 USP19O94966 1318 aa7.74□□□□□ -1.17
NIFKP3-201ENST00000417799 NHSL1Q5SYE7 1610 aa7.74□□□□□ -1.17
NIFKP3-201ENST00000417799 AHDC1Q5TGY3 1603 aaPredicted RBP7.74□□□□□ -1.17
NIFKP3-201ENST00000417799 ANKRD26Q9UPS8 1709 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 FAM95CA0A1B0GW59 222 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 FAM86C2PA6NEL3 165 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 RGS13O14921 159 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 DHX15O43143 795 aaKnown RBP7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 GCP02774 474 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 POLR2BP30876 1174 aaKnown RBP7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 GBP1P32455 592 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 RRS1Q15050 365 aaKnown RBP7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 NFKBIBQ15653 356 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 ZYXQ15942 572 aaKnown RBP7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 FXNQ16595 210 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 CELF2-AS1Q8N7Q2 184 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 CYB5D2Q8WUJ1 264 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 SSBP4Q9BWG4 385 aaPredicted RBP7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 ST7Q9NRC1 585 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 ALS2Q96Q42 1657 aa7.73□□□□□ -1.17
NIFKP3-201ENST00000417799 DYNC1LI2O43237 492 aaPredicted RBP7.72□□□□□ -1.17
NIFKP3-201ENST00000417799 CCNFP41002 786 aa7.72□□□□□ -1.17
NIFKP3-201ENST00000417799 GATA4P43694 442 aa7.72□□□□□ -1.17
NIFKP3-201ENST00000417799 PAOXQ6QHF9 649 aa7.72□□□□□ -1.17
NIFKP3-201ENST00000417799 BEND4Q6ZU67 534 aa7.72□□□□□ -1.17
NIFKP3-201ENST00000417799 MKL1Q969V6 931 aa7.72□□□□□ -1.17
NIFKP3-201ENST00000417799 CFAP53Q96M91 514 aa7.72□□□□□ -1.17
NIFKP3-201ENST00000417799 USP54Q70EL1 1684 aa7.72□□□□□ -1.17
NIFKP3-201ENST00000417799 K7ELQ4 463 aaPredicted RBP7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 BMS1Q14692 1282 aaKnown RBP7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 NFE2L2Q16236 605 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 DDR2Q16832 855 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 XP32Q5T750 250 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 SEZ6L2Q6UXD5 910 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 ARHGEF25Q86VW2 580 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 CLEC10AQ8IUN9 316 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 BAHD1Q8TBE0 780 aaPredicted RBP7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 SLIT3O75094 1523 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 MAP3K19Q56UN5 1328 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 LTBP3Q9NS15 1303 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 INSRP06213 1382 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 PNPLA6Q8IY17 1366 aa7.71□□□□□ -1.18
NIFKP3-201ENST00000417799 SMG6Q86US8 1419 aaKnown RBP7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 PHLPP1O60346 1717 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 MARF1Q9Y4F3 1742 aaKnown RBP7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 DDAH1O94760 285 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 UBOX5O94941 541 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 AMPHP49418 695 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 MICAL1Q8TDZ2 1067 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 PNISRQ8TF01 805 aaKnown RBP7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 DHRS1Q96LJ7 313 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 PSMG3-AS1Q96PY0 264 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 MIPEPQ99797 713 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 PIF1Q9H611 641 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 PHAXQ9H814 394 aaKnown RBP7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 MED1Q15648 1581 aaPredicted RBP7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 KIF24Q5T7B8 1368 aa7.7□□□□□ -1.18
NIFKP3-201ENST00000417799 NFAT5O94916 1531 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 DIAPH1O60610 1272 aaKnown RBP7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 HOXC9P31274 260 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 HSPA1LP34931 641 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 CHMP4BP1P59074 171 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 CDK5R2Q13319 367 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 GPAT2Q6NUI2 795 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 LETMD1Q6P1Q0 360 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 C6orf15Q6UXA7 325 aaPredicted RBP7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 NOP9Q86U38 636 aaKnown RBP7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 FAM9BQ8IZU0 186 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 PPP1R13LQ8WUF5 828 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 IP6K1Q92551 441 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 TP53INP1Q96A56 240 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 SLC6A18Q96N87 628 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 SRPK1Q96SB4 655 aaKnown RBP7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 FAM83CQ9BQN1 747 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 PRDM10Q9NQV6 1147 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 C1GALT1Q9NS00 363 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 CEP131Q9UPN4 1083 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 MAPK8IP1Q9UQF2 711 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 COL16A1Q07092 1604 aaPredicted RBP7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 FLT4P35916 1363 aa7.69□□□□□ -1.18
NIFKP3-201ENST00000417799 CDK12Q9NYV4 1490 aaPredicted RBP7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 CCDC85CA6NKD9 419 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 SLITRK5O94991 958 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 GJB6O95452 261 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 IL13P35225 146 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 WDR43Q15061 677 aaKnown RBP eCLIP7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 HSP90AB2PQ58FF8 381 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 VHLLQ6RSH7 139 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 FAM178BQ8IXR5 827 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 TMEM192Q8IY95 271 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 GIMAP7Q8NHV1 300 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 RIN3Q8TB24 985 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms