RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CHURC1Q8WUH1 139 aa19.03■□□□□ 0.64
SSBP3-205ENST00000417664 TEPSINQ96N21 525 aa19.03■□□□□ 0.64
SSBP3-205ENST00000417664 TMEM60Q9H2L4 133 aa19.03■□□□□ 0.64
SSBP3-205ENST00000417664 VCPKMTQ9H867 229 aa19.03■□□□□ 0.64
SSBP3-205ENST00000417664 A0A087X0B3 334 aa19.02■□□□□ 0.64
SSBP3-205ENST00000417664 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.02■□□□□ 0.64
SSBP3-205ENST00000417664 SHTN1A0MZ66 631 aa19.02■□□□□ 0.64
SSBP3-205ENST00000417664 ESPNB1AK53 854 aa19.02■□□□□ 0.64
SSBP3-205ENST00000417664 BIN1O00499 593 aa19.02■□□□□ 0.64
SSBP3-205ENST00000417664 PTMAP06454 111 aaKnown RBP19.02■□□□□ 0.64
SSBP3-205ENST00000417664 LMNB1P20700 586 aa19.02■□□□□ 0.64
SSBP3-205ENST00000417664 E2F4Q16254 413 aa19.02■□□□□ 0.64
SSBP3-205ENST00000417664 KIF4BQ2VIQ3 1234 aa19.02■□□□□ 0.64
SSBP3-205ENST00000417664 ZSCAN30Q86W11 494 aa19.02■□□□□ 0.64
SSBP3-205ENST00000417664 MLKLQ8NB16 471 aa19.02■□□□□ 0.64
SSBP3-205ENST00000417664 PHF20L1A8MW92 1017 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 GOLGA6L6A8MZA4 724 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 AP5Z1O43299 807 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 TPM3P06753 285 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 ECE1P42892 770 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 FAM160B2Q86V87 743 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 PAGE5Q96GU1 130 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 GSDMAQ96QA5 445 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 TMEM260Q9NX78 707 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 MYL1P05976 194 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 UBA7P41226 1012 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 SAMD7Q7Z3H4 446 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 PLA2G4DQ86XP0 818 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 APOBEC3FQ8IUX4 373 aaKnown RBP19.01■□□□□ 0.63
SSBP3-205ENST00000417664 CDAN1Q8IWY9 1227 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 GPC2Q8N158 579 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 AOPEPQ8N6M6 819 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 ACER1Q8TDN7 264 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 NUP88Q99567 741 aaPredicted RBP19.01■□□□□ 0.63
SSBP3-205ENST00000417664 TRIM5Q9C035 493 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 CUEDC2Q9H467 287 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 MAGEF1Q9HAY2 307 aa19.01■□□□□ 0.63
SSBP3-205ENST00000417664 FOXN1O15353 648 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 CTNND1O60716 968 aaKnown RBP19■□□□□ 0.63
SSBP3-205ENST00000417664 EGFRP00533 1210 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 FOSP01100 380 aaPredicted RBP19■□□□□ 0.63
SSBP3-205ENST00000417664 CDC25BP30305 580 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 USP11P51784 963 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 SEMA3FQ13275 785 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 MORC3Q14149 939 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 DCAF15Q66K64 600 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 MTMR9Q96QG7 549 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 RAB34Q9BZG1 259 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 DISC1Q9NRI5 854 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 HACL1Q9UJ83 578 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 MAN1B1Q9UKM7 699 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 PRR12Q9ULL5 1215 aa19■□□□□ 0.63
SSBP3-205ENST00000417664 ZNF541Q9H0D2 1346 aa18.99■□□□□ 0.63
SSBP3-205ENST00000417664 DICER1Q9UPY3 1922 aaKnown RBP18.99■□□□□ 0.63
SSBP3-205ENST00000417664 TBC1D10BQ4KMP7 808 aaPredicted RBP18.99■□□□□ 0.63
SSBP3-205ENST00000417664 MOXD1Q6UVY6 613 aa18.99■□□□□ 0.63
SSBP3-205ENST00000417664 DEFB129Q9H1M3 183 aa18.99■□□□□ 0.63
SSBP3-205ENST00000417664 FEM1BQ9UK73 627 aa18.99■□□□□ 0.63
SSBP3-205ENST00000417664 A0A087WWV3 80 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 FXR2P51116 673 aaKnown RBP eCLIP18.98■□□□□ 0.638e-6■■■■□ 21.8
SSBP3-205ENST00000417664 ZNF75DP51815 510 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 DPYDQ12882 1025 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 PDIA5Q14554 519 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 CALCRLQ16602 461 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 UBE2SQ16763 222 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 TMEM266Q2M3C6 531 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 PDXDC2PQ6P474 469 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 SPICE1Q8N0Z3 855 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 IGSF22Q8N9C0 903 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 LPAR1Q92633 364 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 MRFAP1L1Q96HT8 127 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 PPP2R3BQ9Y5P8 575 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 GTPBP6O43824 516 aaPredicted RBP18.98■□□□□ 0.63
SSBP3-205ENST00000417664 PRR29P0C7W0 189 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 STAT6P42226 847 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 MYL5Q02045 173 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 FAM83BQ5T0W9 1011 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 RRAGBQ5VZM2 374 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 ARHGAP27Q6ZUM4 889 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 GPRC5DQ9NZD1 345 aa18.98■□□□□ 0.63
SSBP3-205ENST00000417664 PIK3CDO00329 1044 aa18.97■□□□□ 0.63
SSBP3-205ENST00000417664 KIAA1683Q9H0B3 1180 aa18.97■□□□□ 0.63
SSBP3-205ENST00000417664 RANBP17Q9H2T7 1088 aaKnown RBP18.97■□□□□ 0.63
SSBP3-205ENST00000417664 CYP3A7-CYP3A51PA0A087WV96 503 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 MEIS2O14770 477 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 EDIL3O43854 480 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 CYP3A7P24462 503 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 MSNP26038 577 aaKnown RBP18.96■□□□□ 0.63
SSBP3-205ENST00000417664 ERCC5P28715 1186 aaPredicted RBP18.96■□□□□ 0.63
SSBP3-205ENST00000417664 AFMP43652 599 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 NCAPHQ15003 741 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 RASSF8Q8NHQ8 419 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 ZNF341Q9BYN7 854 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 ANO3Q9BYT9 981 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 RMND1Q9NWS8 449 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 ZKSCAN5Q9Y2L8 839 aa18.96■□□□□ 0.63
SSBP3-205ENST00000417664 WDR46O15213 610 aaKnown RBP18.95■□□□□ 0.62
SSBP3-205ENST00000417664 BMP6P22004 513 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 KARSQ15046 597 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms