RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 NONOQ15233 471 aaKnown RBP eCLIP19.37■□□□□ 0.69
CALD1-204ENST00000417172 CHURC1Q8WUH1 139 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 CUL5Q93034 780 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 WDR18Q9BV38 432 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 TANGO6Q9C0B7 1094 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 CLSTN2Q9H4D0 955 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 FEM1BQ9UK73 627 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 RLFQ13129 1914 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 WDR46O15213 610 aaKnown RBP19.37■□□□□ 0.69
CALD1-204ENST00000417172 EDIL3O43854 480 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 HMGCS2P54868 508 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 ATP2C1P98194 919 aaPredicted RBP19.37■□□□□ 0.69
CALD1-204ENST00000417172 FMR1Q06787 632 aaKnown RBP eCLIP19.37■□□□□ 0.69
CALD1-204ENST00000417172 LETM2Q2VYF4 491 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 NOL9Q5SY16 702 aaKnown RBP19.37■□□□□ 0.69
CALD1-204ENST00000417172 RESP18Q5W5W9 173 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 USP49Q70CQ1 688 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 CKAP2LQ8IYA6 745 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 LPAR1Q92633 364 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 P2RX7Q99572 595 aaKnown RBP19.37■□□□□ 0.69
CALD1-204ENST00000417172 CSRNP2Q9H175 543 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 RANBP17Q9H2T7 1088 aaKnown RBP19.37■□□□□ 0.69
CALD1-204ENST00000417172 DDX19AQ9NUU7 478 aaKnown RBP19.37■□□□□ 0.69
CALD1-204ENST00000417172 IQCA1LA6NCM1 817 aa19.36■□□□□ 0.69
CALD1-204ENST00000417172 SOCS7O14512 581 aa19.36■□□□□ 0.69
CALD1-204ENST00000417172 IL17AQ16552 155 aa19.36■□□□□ 0.69
CALD1-204ENST00000417172 LRSAM1Q6UWE0 723 aa19.36■□□□□ 0.69
CALD1-204ENST00000417172 C4orf32Q8N8J7 132 aa19.36■□□□□ 0.69
CALD1-204ENST00000417172 ZC3H15Q8WU90 426 aaKnown RBP19.36■□□□□ 0.69
CALD1-204ENST00000417172 TMEM60Q9H2L4 133 aa19.36■□□□□ 0.69
CALD1-204ENST00000417172 RPAP3Q9H6T3 665 aaPredicted RBP19.36■□□□□ 0.69
CALD1-204ENST00000417172 SRPRBQ9Y5M8 271 aaKnown RBP19.36■□□□□ 0.69
CALD1-204ENST00000417172 FAM160B2Q86V87 743 aa19.35■□□□□ 0.69
CALD1-204ENST00000417172 ERCC4Q92889 916 aaPredicted RBP19.35■□□□□ 0.69
CALD1-204ENST00000417172 CLMNQ96JQ2 1002 aa19.35■□□□□ 0.69
CALD1-204ENST00000417172 TNMDQ9H2S6 317 aa19.35■□□□□ 0.69
CALD1-204ENST00000417172 AS3MTQ9HBK9 375 aa19.35■□□□□ 0.69
CALD1-204ENST00000417172 GOLGA6L3A6NEY3 463 aa19.35■□□□□ 0.69
CALD1-204ENST00000417172 MEIS2O14770 477 aa19.35■□□□□ 0.69
CALD1-204ENST00000417172 PLA2G6O60733 806 aa19.35■□□□□ 0.69
CALD1-204ENST00000417172 MAP3K9P80192 1104 aa19.35■□□□□ 0.69
CALD1-204ENST00000417172 VWA3AA6NCI4 1184 aa19.34■□□□□ 0.69
CALD1-204ENST00000417172 PPP1R12BO60237 982 aaPredicted RBP19.34■□□□□ 0.69
CALD1-204ENST00000417172 CCNT1O60563 726 aaKnown RBP19.34■□□□□ 0.69
CALD1-204ENST00000417172 FLOT1O75955 427 aa19.34■□□□□ 0.69
CALD1-204ENST00000417172 MRPL12P52815 198 aaKnown RBP19.34■□□□□ 0.69
CALD1-204ENST00000417172 MAP1SQ66K74 1059 aaPredicted RBP19.34■□□□□ 0.69
CALD1-204ENST00000417172 NEK8Q86SG6 692 aa19.34■□□□□ 0.69
CALD1-204ENST00000417172 WNK4Q96J92 1243 aa19.34■□□□□ 0.69
CALD1-204ENST00000417172 SLF1Q9BQI6 1058 aa19.34■□□□□ 0.69
CALD1-204ENST00000417172 CLEC11AQ9Y240 323 aa19.34■□□□□ 0.69
CALD1-204ENST00000417172 HPSEQ9Y251 543 aa19.34■□□□□ 0.69
CALD1-204ENST00000417172 AFG3L2Q9Y4W6 797 aa19.34■□□□□ 0.69
CALD1-204ENST00000417172 TRAF5O00463 557 aa19.33■□□□□ 0.69
CALD1-204ENST00000417172 KINO60870 393 aaKnown RBP19.33■□□□□ 0.69
CALD1-204ENST00000417172 HOXA13P31271 388 aaPredicted RBP19.33■□□□□ 0.69
CALD1-204ENST00000417172 USP14P54578 494 aa19.33■□□□□ 0.69
CALD1-204ENST00000417172 TBC1D5Q92609 795 aa19.33■□□□□ 0.69
CALD1-204ENST00000417172 AGBL1Q96MI9 1066 aa19.33■□□□□ 0.69
CALD1-204ENST00000417172 ZNF202O95125 648 aa19.33■□□□□ 0.68
CALD1-204ENST00000417172 TDP2O95551 362 aa19.33■□□□□ 0.68
CALD1-204ENST00000417172 TTLL12Q14166 644 aaPredicted RBP19.33■□□□□ 0.68
CALD1-204ENST00000417172 MAP3K11Q16584 847 aa19.33■□□□□ 0.68
CALD1-204ENST00000417172 EPSTI1Q96J88 318 aa19.33■□□□□ 0.68
CALD1-204ENST00000417172 PANK2Q9BZ23 570 aa19.33■□□□□ 0.68
CALD1-204ENST00000417172 ELP3Q9H9T3 547 aa19.33■□□□□ 0.68
CALD1-204ENST00000417172 ZNF536O15090 1300 aa19.32■□□□□ 0.68
CALD1-204ENST00000417172 BMP15O95972 392 aa19.32■□□□□ 0.68
CALD1-204ENST00000417172 SYKP43405 635 aa19.32■□□□□ 0.68
CALD1-204ENST00000417172 LDHDQ86WU2 507 aa19.32■□□□□ 0.68
CALD1-204ENST00000417172 PRPF38AQ8NAV1 312 aaKnown RBP19.32■□□□□ 0.68
CALD1-204ENST00000417172 RRAGCQ9HB90 399 aa19.32■□□□□ 0.68
CALD1-204ENST00000417172 PNMA8AQ86V59 439 aaPredicted RBP19.31■□□□□ 0.68
CALD1-204ENST00000417172 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 CPXCR1Q8N123 301 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 FUCA2Q9BTY2 467 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 RBSNQ9H1K0 784 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 KCNH3Q9ULD8 1083 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 CSADQ9Y600 493 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 MORC2Q9Y6X9 1032 aaPredicted RBP19.31■□□□□ 0.68
CALD1-204ENST00000417172 A0A087WWV3 80 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 A0A087X0B3 334 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 FAM237AA0A1B0GTK4 181 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 SLC37A4O43826 429 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 IREB2P48200 963 aaKnown RBP19.31■□□□□ 0.68
CALD1-204ENST00000417172 PDILTQ8N807 584 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 FERMT2Q96AC1 680 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 ATG4CQ96DT6 458 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 ANO3Q9BYT9 981 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 RAVER2Q9HCJ3 691 aaKnown RBP19.31■□□□□ 0.68
CALD1-204ENST00000417172 PPP1R9AQ9ULJ8 1098 aa19.31■□□□□ 0.68
CALD1-204ENST00000417172 NF2P35240 595 aa19.3■□□□□ 0.68
CALD1-204ENST00000417172 RBM43Q6ZSC3 357 aaKnown RBP19.3■□□□□ 0.68
CALD1-204ENST00000417172 ZNF579Q8NAF0 562 aaKnown RBP19.3■□□□□ 0.68
CALD1-204ENST00000417172 SYMPKQ92797 1274 aaKnown RBP19.3■□□□□ 0.68
CALD1-204ENST00000417172 OTUD5Q96G74 571 aa19.3■□□□□ 0.68
CALD1-204ENST00000417172 C12orf42Q96LP6 360 aa19.3■□□□□ 0.68
CALD1-204ENST00000417172 TSPY26PQ9H489 355 aa19.3■□□□□ 0.68
CALD1-204ENST00000417172 ZNF408Q9H9D4 720 aa19.3■□□□□ 0.68
CALD1-204ENST00000417172 CCPG1Q9ULG6 757 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms