RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 LBX2Q6XYB7 198 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 HEATR3Q7Z4Q2 680 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 PDCD7Q8N8D1 485 aaKnown RBP9.33□□□□□ -0.92
MDC1-203ENST00000417033 PRPF38AQ8NAV1 312 aaKnown RBP9.33□□□□□ -0.92
MDC1-203ENST00000417033 RRP36Q96EU6 259 aaKnown RBP9.33□□□□□ -0.92
MDC1-203ENST00000417033 LLPHQ9BRT6 129 aaKnown RBP9.33□□□□□ -0.92
MDC1-203ENST00000417033 ALG1Q9BT22 464 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 SLC38A10Q9HBR0 1119 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 RBPJLQ9UBG7 517 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 ZNF214Q9UL59 606 aaPredicted RBP9.33□□□□□ -0.92
MDC1-203ENST00000417033 ADAMTS5Q9UNA0 930 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 SMC3Q9UQE7 1217 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 RIPK3Q9Y572 518 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 PNMA6FA0A0J9YX94 578 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 STXBP3O00186 592 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 OPLAHO14841 1288 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 CDKL5O76039 1030 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 DEXIO95424 95 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 HSP90AA1P07900 732 aaKnown RBP9.32□□□□□ -0.92
MDC1-203ENST00000417033 SCG2P13521 617 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 OSBPP22059 807 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 SMARCA1P28370 1054 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 TM4SF4P48230 202 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 SREBF2Q12772 1141 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 CRHR2Q13324 411 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 PKP1Q13835 747 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 TAF1CQ15572 869 aaPredicted RBP9.32□□□□□ -0.92
MDC1-203ENST00000417033 Q3C1V9 767 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 MUM1L1Q5H9M0 696 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 TRIM22Q8IYM9 498 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 INTS4Q96HW7 963 aaKnown RBP9.32□□□□□ -0.92
MDC1-203ENST00000417033 HOMER2Q9NSB8 354 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 CPA4Q9UI42 421 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 KCNJ14Q9UNX9 436 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 SLC45A1Q9Y2W3 748 aa9.32□□□□□ -0.92
MDC1-203ENST00000417033 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.32□□□□□ -0.92
MDC1-203ENST00000417033 COL11A1P12107 1806 aaPredicted RBP9.32□□□□□ -0.92
MDC1-203ENST00000417033 MYPNQ86TC9 1320 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 NFIBO00712 420 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 ZBED4O75132 1171 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 ICAM1P05362 532 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 HMGN5P82970 282 aaKnown RBP9.31□□□□□ -0.92
MDC1-203ENST00000417033 AKAP17AQ02040 695 aaKnown RBP9.31□□□□□ -0.92
MDC1-203ENST00000417033 PABPC4Q13310 644 aaKnown RBP eCLIP9.31□□□□□ -0.92
MDC1-203ENST00000417033 PLS1Q14651 629 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 NPY5RQ15761 445 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 NOM1Q5C9Z4 860 aaKnown RBP9.31□□□□□ -0.92
MDC1-203ENST00000417033 SNRNP48Q6IEG0 339 aaKnown RBP9.31□□□□□ -0.92
MDC1-203ENST00000417033 FBXO11Q86XK2 927 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 SMCR8Q8TEV9 937 aaPredicted RBP9.31□□□□□ -0.92
MDC1-203ENST00000417033 TBC1D5Q92609 795 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 IPO9Q96P70 1041 aaKnown RBP9.31□□□□□ -0.92
MDC1-203ENST00000417033 PARK7Q99497 189 aaKnown RBP9.31□□□□□ -0.92
MDC1-203ENST00000417033 MOV10L1Q9BXT6 1211 aaKnown RBP9.31□□□□□ -0.92
MDC1-203ENST00000417033 PORCNQ9H237 461 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 SEC63Q9UGP8 760 aaKnown RBP9.31□□□□□ -0.92
MDC1-203ENST00000417033 PNMA3Q9UL41 463 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 CCPG1Q9ULG6 757 aa9.31□□□□□ -0.92
MDC1-203ENST00000417033 TBC1D8O95759 1140 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 BCRP11274 1271 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 ALAS1P13196 640 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 DDIT3P35638 169 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 NAPAP54920 295 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 CAP1Q01518 475 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 UBE2SQ16763 222 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
MDC1-203ENST00000417033 KRT40Q6A162 431 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 FAM184AQ8NB25 1140 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 RASGRP4Q8TDF6 673 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 CLEC4DQ8WXI8 215 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 FOXD4L4Q8WXT5 416 aaPredicted RBP9.3□□□□□ -0.92
MDC1-203ENST00000417033 C8orf76Q96K31 380 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 AMNQ9BXJ7 453 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 SPATC1LQ9H0A9 340 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 EFCC1Q9HA90 598 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 RNF146Q9NTX7 359 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 RNF186Q9NXI6 227 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 BARHL2Q9NY43 387 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 HOXC10Q9NYD6 342 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 METRNQ9UJH8 293 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 CTDP1Q9Y5B0 961 aaPredicted RBP9.3□□□□□ -0.92
MDC1-203ENST00000417033 PCDHA1Q9Y5I3 950 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 MYH6P13533 1939 aa9.3□□□□□ -0.92
MDC1-203ENST00000417033 ZSWIM8A7E2V4 1837 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 FAM205CA6NFA0 338 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 KIF28PB7ZC32 967 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 ATP2A1O14983 1001 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 CA12O43570 354 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 TRPA1O75762 1119 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 ERCC3P19447 782 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 SYT1P21579 422 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 CTGFP29279 349 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 MAP2K2P36507 400 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 STAT3P40763 770 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 INHBEP58166 350 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 ERVK-9P63128 1117 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 ERVK-24P63145 666 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms