RNA–Protein interactions for RNA: ENST00000416519.1

TUBBP6-201, Transcript of tubulin beta class I pseudogene 6, humanhuman

BASIC

Gene TUBBP6, Length 1,332 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP6-201ENST00000416519 UPF3AQ9H1J1 476 aaKnown RBP12.15□□□□□ -0.46
TUBBP6-201ENST00000416519 VTA1Q9NP79 307 aa12.15□□□□□ -0.46
TUBBP6-201ENST00000416519 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
TUBBP6-201ENST00000416519 ZSWIM5Q9P217 1185 aa12.15□□□□□ -0.46
TUBBP6-201ENST00000416519 ATP11BQ9Y2G3 1177 aa12.15□□□□□ -0.46
TUBBP6-201ENST00000416519 PGK1P00558 417 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 CHMLP26374 656 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 ACLYP53396 1101 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 TNFAIP2Q03169 654 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 KCNA10Q16322 511 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 ANO1Q5XXA6 986 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 NSMFQ6X4W1 530 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 MCF2L2Q86YR7 1114 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 MTA3Q9BTC8 594 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 MTMR7Q9Y216 660 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 SYNRGQ9UMZ2 1314 aa12.14□□□□□ -0.47
TUBBP6-201ENST00000416519 A0A1W2PQ45 241 aaPredicted RBP12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 A0A1W2PQY0 241 aa12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 NKRFO15226 690 aaKnown RBP eCLIP12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 PARP1P09874 1014 aaKnown RBP12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 PDE4AP27815 886 aa12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 SLC16A2P36021 539 aa12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 BRDTQ58F21 947 aaPredicted RBP12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 GNASQ5JWF2 1037 aa12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 IFIT1BQ5T764 474 aaKnown RBP12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 CCSAPQ6IQ19 270 aaPredicted RBP12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 TTBK2Q6IQ55 1244 aa12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 RNF207Q6ZRF8 634 aa12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 KIAA1211Q6ZU35 1233 aa12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 NEDD4P46934 1319 aa12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 TRIOBPQ9H2D6 2365 aa12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 ZNFX1Q9P2E3 1918 aaKnown RBP12.13□□□□□ -0.47
TUBBP6-201ENST00000416519 A0A0U1RQG5 324 aaPredicted RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 PTPDC1A2A3K4 754 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 SOWAHBA6NEL2 793 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 B4E1Z4 1266 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 TLR3O15455 904 aaKnown RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 CLTBP09497 229 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 GSPT1P15170 499 aaKnown RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 BAATQ14032 418 aaPredicted RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 RALYLQ86SE5 291 aaKnown RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 TMTC2Q8N394 836 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 NCOA7Q8NI08 942 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 FERMT2Q96AC1 680 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 VTI1AQ96AJ9 217 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 FGD4Q96M96 766 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 KATNBL1Q9H079 304 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 MRPL11Q9Y3B7 192 aaKnown RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 COL11A1P12107 1806 aaPredicted RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 TNKSO95271 1327 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 ABCB11O95342 1321 aa12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
TUBBP6-201ENST00000416519 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 SGSM2O43147 1006 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 ASGR1P07306 291 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 TLE2Q04725 743 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 TRIM60Q495X7 471 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 ZKSCAN3Q9BRR0 538 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 GNEQ9Y223 722 aaKnown RBP12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 ARVCFO00192 962 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 KPNA6O60684 536 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 RAG1P15918 1043 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 CDK7P50613 346 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 PDE4DQ08499 809 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 DUSP28Q4G0W2 176 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 FAM109BQ6ICB4 259 aaPredicted RBP12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 TAPT1Q6NXT6 567 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 CENPQQ7L2Z9 268 aaPredicted RBP12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 FBXO11Q86XK2 927 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 ADGRF4Q8IZF3 695 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 CLEC4DQ8WXI8 215 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 MAP4K1Q92918 833 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 IWS1Q96ST2 819 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 PDLIM7Q9NR12 457 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 TMEM39AQ9NV64 488 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
TUBBP6-201ENST00000416519 NFIBO00712 420 aa12.1□□□□□ -0.47
TUBBP6-201ENST00000416519 IFIT3O14879 490 aaKnown RBP12.1□□□□□ -0.47
TUBBP6-201ENST00000416519 DHX16O60231 1041 aaKnown RBP12.1□□□□□ -0.47
TUBBP6-201ENST00000416519 CPT1AP50416 773 aa12.1□□□□□ -0.47
TUBBP6-201ENST00000416519 SNAP25P60880 206 aa12.1□□□□□ -0.47
TUBBP6-201ENST00000416519 RPS6P62753 249 aaKnown RBP12.1□□□□□ -0.47
TUBBP6-201ENST00000416519 FSCN1Q16658 493 aaKnown RBP12.1□□□□□ -0.47
TUBBP6-201ENST00000416519 CASC1Q6TDU7 716 aa12.1□□□□□ -0.47
TUBBP6-201ENST00000416519 TLK2Q86UE8 772 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms