RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 PURBQ96QR8 312 aaKnown RBP11.22□□□□□ -0.61
LINC01238-201ENST00000416204 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
LINC01238-201ENST00000416204 AP5M1Q9H0R1 490 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 SLC38A10Q9HBR0 1119 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 C11orf16Q9NQ32 467 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
LINC01238-201ENST00000416204 TLL1O43897 1013 aa11.21□□□□□ -0.61
LINC01238-201ENST00000416204 TMCO2Q7Z6W1 182 aaPredicted RBP11.21□□□□□ -0.61
LINC01238-201ENST00000416204 ALYREFQ86V81 257 aaKnown RBP11.21□□□□□ -0.61
LINC01238-201ENST00000416204 CLASRPQ8N2M8 674 aaKnown RBP11.21□□□□□ -0.61
LINC01238-201ENST00000416204 PANK1Q8TE04 598 aa11.21□□□□□ -0.61
LINC01238-201ENST00000416204 CD320Q9NPF0 282 aa11.21□□□□□ -0.61
LINC01238-201ENST00000416204 GNEQ9Y223 722 aaKnown RBP11.21□□□□□ -0.61
LINC01238-201ENST00000416204 CHMP4BP1P59074 171 aa11.2□□□□□ -0.62
LINC01238-201ENST00000416204 IKQ13123 557 aaPredicted RBP11.2□□□□□ -0.62
LINC01238-201ENST00000416204 RPUSD2Q8IZ73 545 aaKnown RBP11.2□□□□□ -0.62
LINC01238-201ENST00000416204 FAM133AQ8N9E0 248 aa11.2□□□□□ -0.62
LINC01238-201ENST00000416204 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
LINC01238-201ENST00000416204 A1CFQ9NQ94 594 aaKnown RBP11.2□□□□□ -0.62
LINC01238-201ENST00000416204 RNF146Q9NTX7 359 aa11.2□□□□□ -0.62
LINC01238-201ENST00000416204 COG6Q9Y2V7 657 aa11.2□□□□□ -0.62
LINC01238-201ENST00000416204 WDFY4Q6ZS81 3184 aa11.2□□□□□ -0.62
LINC01238-201ENST00000416204 ZBED9Q6R2W3 1325 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 LRRC37A2A6NM11 1700 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 TMEM232C9JQI7 657 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 ATP2A1O14983 1001 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 MYL3P08590 195 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 ALAS1P13196 640 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 TAP1Q03518 808 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 GRB10Q13322 594 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 FAM47CQ5HY64 1035 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 SLFN13Q68D06 897 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 RASGRP2Q7LDG7 609 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 CHST13Q8NET6 341 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 GDPD5Q8WTR4 605 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC01238-201ENST00000416204 HLA-CQ95604 372 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 FTOQ9C0B1 505 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC01238-201ENST00000416204 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC01238-201ENST00000416204 ACAD9Q9H845 621 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 NYAP2Q9P242 653 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 FEM1BQ9UK73 627 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 MTUS1Q9ULD2 1270 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 MTMR7Q9Y216 660 aa11.19□□□□□ -0.62
LINC01238-201ENST00000416204 TNKSO95271 1327 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 LCHNA4D1U4 455 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 ZEB2O60315 1214 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 CABYRO75952 493 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 MUM1L1Q5H9M0 696 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 TAPT1Q6NXT6 567 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 KIAA1211Q6ZU35 1233 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 KIF1BPQ96EK5 621 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 TRERF1Q96PN7 1200 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 UIMC1Q96RL1 719 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 HAUS7Q99871 368 aa11.18□□□□□ -0.62
LINC01238-201ENST00000416204 ARPP21Q9UBL0 812 aaPredicted RBP11.18□□□□□ -0.62
LINC01238-201ENST00000416204 ZNF536O15090 1300 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 IGKV6D-41A0A0C4DH26 115 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 ASB14A6NK59 587 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 GSG1L2A8MUP6 293 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 SMARCA5O60264 1052 aaPredicted RBP11.17□□□□□ -0.62
LINC01238-201ENST00000416204 BMP3P12645 472 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 NKX3-2P78367 333 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 UBE3CQ15386 1083 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 HSP90AB4PQ58FF6 505 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 NSMFQ6X4W1 530 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 KCTD1Q719H9 257 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 HERC6Q8IVU3 1022 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 STRBPQ96SI9 672 aaKnown RBP11.17□□□□□ -0.62
LINC01238-201ENST00000416204 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
LINC01238-201ENST00000416204 COG5Q9UP83 839 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 SCN5AQ14524 2016 aa11.17□□□□□ -0.62
LINC01238-201ENST00000416204 GREB1LQ9C091 1923 aaPredicted RBP11.16□□□□□ -0.62
LINC01238-201ENST00000416204 LPXNO60711 386 aa11.16□□□□□ -0.62
LINC01238-201ENST00000416204 APPP05067 770 aa11.16□□□□□ -0.62
LINC01238-201ENST00000416204 ATP5JP18859 108 aa11.16□□□□□ -0.62
LINC01238-201ENST00000416204 MCCP23508 829 aa11.16□□□□□ -0.62
LINC01238-201ENST00000416204 TDO2P48775 406 aa11.16□□□□□ -0.62
LINC01238-201ENST00000416204 TSHZ3Q63HK5 1081 aa11.16□□□□□ -0.62
LINC01238-201ENST00000416204 DIEXFQ68CQ4 756 aaKnown RBP11.16□□□□□ -0.62
LINC01238-201ENST00000416204 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC01238-201ENST00000416204 SIRT2Q8IXJ6 389 aa11.16□□□□□ -0.62
LINC01238-201ENST00000416204 ZNF444Q8N0Y2 327 aaPredicted RBP11.16□□□□□ -0.62
LINC01238-201ENST00000416204 MTMR4Q9NYA4 1195 aa11.16□□□□□ -0.62
LINC01238-201ENST00000416204 MUC6Q6W4X9 2439 aa11.16□□□□□ -0.62
LINC01238-201ENST00000416204 GPR37L1O60883 481 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 TTLL1O95922 423 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 ACTN1P12814 892 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 OAZ1P54368 228 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 PURAQ00577 322 aaKnown RBP11.15□□□□□ -0.62
LINC01238-201ENST00000416204 NBPF20Q3BBV1 942 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 IQSEC1Q6DN90 963 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 FAM117BQ6P1L5 589 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 COPS5Q92905 334 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 OSBP2Q969R2 916 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 WDR11Q9BZH6 1224 aa11.15□□□□□ -0.62
LINC01238-201ENST00000416204 CYP39A1Q9NYL5 469 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms