RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 CYP2C19P33261 490 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 GGCXP38435 758 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 TRIM68Q6AZZ1 485 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 U2AF1L4Q8WU68 220 aaKnown RBP14.2□□□□□ -0.14
SCN1B-202ENST00000415950 SENP2Q9HC62 589 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 CIB2O75838 187 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 IFNB1P01574 187 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 TFRCP02786 760 aaKnown RBP14.19□□□□□ -0.14
SCN1B-202ENST00000415950 PDE6BP35913 854 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 GRIN1Q05586 938 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 GEN1Q17RS7 908 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 CCDC38Q502W7 563 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 KRT26Q7Z3Y9 468 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 BTG4Q9NY30 223 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 USP6P35125 1406 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 CLTCL1P53675 1640 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 TRAF1Q13077 416 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 CALCRLQ16602 461 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 TCP11Q8WWU5 503 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 MAK16Q9BXY0 300 aaKnown RBP14.19□□□□□ -0.14
SCN1B-202ENST00000415950 EXOC3O60645 756 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 SARNPP82979 210 aaKnown RBP14.19□□□□□ -0.14
SCN1B-202ENST00000415950 KANSL2Q9H9L4 492 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 NFU1Q9UMS0 254 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 GINS2Q9Y248 185 aa14.19□□□□□ -0.14
SCN1B-202ENST00000415950 ABCA9Q8IUA7 1624 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 FMNL1O95466 1100 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 ARHGEF25Q86VW2 580 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 UBL4BQ8N7F7 174 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 MARCH10Q8NA82 808 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 FOXP1Q9H334 677 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 PREX2Q70Z35 1606 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 TMEM2Q9UHN6 1383 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 FDPSP14324 419 aaKnown RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 TCP1P17987 556 aaKnown RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 PTPREP23469 700 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 EIF4A3P38919 411 aaKnown RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 PLA2G4AP47712 749 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 FYB2Q5VWT5 728 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 RESP18Q5W5W9 173 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 FAM184BQ9ULE4 1060 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 RIPOR2Q9Y4F9 1068 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 FRMPD2Q68DX3 1309 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 BAZ2BQ9UIF8 2168 aaKnown RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 PP2D1A8MPX8 630 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 RGS16O15492 202 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 FLOT1O75955 427 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 RFC1P35251 1148 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 NNTQ13423 1086 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 DIXDC1Q155Q3 683 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 NYAP1Q6ZVC0 841 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 SRPRBQ9Y5M8 271 aaKnown RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 RPUSD2Q8IZ73 545 aaKnown RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 REXO1Q8N1G1 1221 aaKnown RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 ZBTB38Q8NAP3 1195 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 CCDC110Q8TBZ0 833 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 RPGRIP1Q96KN7 1286 aa14.18□□□□□ -0.14
SCN1B-202ENST00000415950 NHEJ1Q9H9Q4 299 aaPredicted RBP14.18□□□□□ -0.14
SCN1B-202ENST00000415950 KLRF2D3W0D1 207 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 ZNF185O15231 689 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 ATP5DP30049 168 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 SLCO1A2P46721 670 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 UBE3CQ15386 1083 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 DDB1Q16531 1140 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 WDR44Q5JSH3 913 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 KIFC2Q96AC6 838 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 TTC26A0AVF1 554 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 PPP1R2P41236 205 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 ST3GAL1Q11201 340 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 PPP2R5CQ13362 524 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 ANKRD20A3Q5VUR7 823 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 TAB3Q8N5C8 712 aaPredicted RBP14.17□□□□□ -0.14
SCN1B-202ENST00000415950 ADAMTS1Q9UHI8 967 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 CD2APQ9Y5K6 639 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 MRFAP1Q9Y605 127 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.17□□□□□ -0.14
SCN1B-202ENST00000415950 PCDH11XQ9BZA7 1347 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 PCDH11YQ9BZA8 1340 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 CDK12Q9NYV4 1490 aaPredicted RBP14.17□□□□□ -0.14
SCN1B-202ENST00000415950 GCNT3O95395 438 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 PLCG2P16885 1265 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 FXR1P51114 621 aaKnown RBP eCLIP14.17□□□□□ -0.14
SCN1B-202ENST00000415950 USH1GQ495M9 461 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 TBC1D10BQ4KMP7 808 aaPredicted RBP14.17□□□□□ -0.14
SCN1B-202ENST00000415950 DENND2CQ68D51 928 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 NOA1Q8NC60 698 aaKnown RBP14.17□□□□□ -0.14
SCN1B-202ENST00000415950 MED23Q9ULK4 1368 aa14.17□□□□□ -0.14
SCN1B-202ENST00000415950 POLR1AO95602 1720 aaPredicted RBP14.17□□□□□ -0.14
SCN1B-202ENST00000415950 NCK2O43639 380 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 STX2P32856 288 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 GCKP35557 465 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 CYP4A11Q02928 519 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 TSNAXIP1Q2TAA8 658 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 RAD9BQ6WBX8 426 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 MYCBPQ99417 103 aaPredicted RBP14.16□□□□□ -0.14
SCN1B-202ENST00000415950 MLXIPQ9HAP2 919 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 ZBTB1Q9Y2K1 713 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 PARP3Q9Y6F1 533 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms