RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 USP17L19D6RCP7 530 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 USP17L20D6RJB6 530 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 hCG_1984214I3L0E3 225 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 M0R2N6 131 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 VWA5AO00534 786 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 USP17L24Q0WX57 530 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 SNAPC2Q13487 334 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 COG2Q14746 738 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 SPRYD7Q5W111 196 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 CPXCR1Q8N123 301 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 ZNF713Q8N859 430 aaPredicted RBP17.78■□□□□ 0.44
SHMT2-202ENST00000414700 SPDYE16A6NNV3 312 aaPredicted RBP17.77■□□□□ 0.44
SHMT2-202ENST00000414700 OPLAHO14841 1288 aa17.77■□□□□ 0.44
SHMT2-202ENST00000414700 NCLP19338 710 aaKnown RBP17.77■□□□□ 0.44
SHMT2-202ENST00000414700 DSG3P32926 999 aa17.77■□□□□ 0.44
SHMT2-202ENST00000414700 ZNF445P59923 1031 aa17.77■□□□□ 0.44
SHMT2-202ENST00000414700 MYSM1Q5VVJ2 828 aa17.77■□□□□ 0.44
SHMT2-202ENST00000414700 GPAT2Q6NUI2 795 aa17.77■□□□□ 0.44
SHMT2-202ENST00000414700 CCDC12Q8WUD4 166 aaPredicted RBP17.77■□□□□ 0.44
SHMT2-202ENST00000414700 RAVER2Q9HCJ3 691 aaKnown RBP17.77■□□□□ 0.44
SHMT2-202ENST00000414700 R3HCC1Q9Y3T6 440 aaKnown RBP17.77■□□□□ 0.44
SHMT2-202ENST00000414700 ATP6V1DQ9Y5K8 247 aa17.77■□□□□ 0.44
SHMT2-202ENST00000414700 CALML3P27482 149 aa17.77■□□□□ 0.43
SHMT2-202ENST00000414700 CEBPZQ03701 1054 aaKnown RBP17.77■□□□□ 0.43
SHMT2-202ENST00000414700 UBE2SQ16763 222 aa17.77■□□□□ 0.43
SHMT2-202ENST00000414700 BRAPQ7Z569 592 aa17.77■□□□□ 0.43
SHMT2-202ENST00000414700 NOL7Q9UMY1 257 aaKnown RBP17.77■□□□□ 0.43
SHMT2-202ENST00000414700 PCDHA6Q9UN73 950 aa17.77■□□□□ 0.43
SHMT2-202ENST00000414700 ADAMTS5Q9UNA0 930 aa17.77■□□□□ 0.43
SHMT2-202ENST00000414700 AGTPBP1Q9UPW5 1226 aa17.77■□□□□ 0.43
SHMT2-202ENST00000414700 PCDHA8Q9Y5H6 950 aa17.77■□□□□ 0.43
SHMT2-202ENST00000414700 ESYT2A0FGR8 921 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 HOXA7P31268 230 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-202ENST00000414700 ZNF157P51786 506 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-202ENST00000414700 DAGLBQ8NCG7 672 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 USP28Q96RU2 1077 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 C6orf50Q9HD87 102 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 TMEM260Q9NX78 707 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 FAM13BQ9NYF5 915 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 BIN2Q9UBW5 565 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-202ENST00000414700 WNT7AO00755 349 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 FIBPO43427 364 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 ICAM1P05362 532 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 TOB1P50616 345 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-202ENST00000414700 ADCY7P51828 1080 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 USP17L6PQ6QN14 398 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 PGBD1Q96JS3 809 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 P2RX7Q99572 595 aaKnown RBP17.76■□□□□ 0.43
SHMT2-202ENST00000414700 ASCC2Q9H1I8 757 aaPredicted RBP17.76■□□□□ 0.43
SHMT2-202ENST00000414700 BRMS1Q9HCU9 246 aa17.76■□□□□ 0.43
SHMT2-202ENST00000414700 GNA11P29992 359 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 TMEM132BQ14DG7 1078 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 PPP1R18Q6NYC8 613 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 RASAL3Q86YV0 1011 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 BRI3BPQ8WY22 251 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 TBC1D5Q92609 795 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 PSTPIP2Q9H939 334 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 RIC8AQ9NPQ8 531 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 ZNF214Q9UL59 606 aaPredicted RBP17.75■□□□□ 0.43
SHMT2-202ENST00000414700 CCPG1Q9ULG6 757 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 RIPK3Q9Y572 518 aa17.75■□□□□ 0.43
SHMT2-202ENST00000414700 DDX49Q9Y6V7 483 aaKnown RBP17.75■□□□□ 0.43
SHMT2-202ENST00000414700 UQCRHLA0A096LP55 91 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 CCL15-CCL14A0A0B4J2E2 113 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 DYNC1I1O14576 645 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 UQCRHP07919 91 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 ZBTB48P10074 688 aaPredicted RBP17.74■□□□□ 0.43
SHMT2-202ENST00000414700 CCL15Q16663 113 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 CSPP1Q1MSJ5 1256 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 JAKMIP3Q5VZ66 844 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 GALNT17Q6IS24 598 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 FASTKD5Q7L8L6 764 aaKnown RBP17.74■□□□□ 0.43
SHMT2-202ENST00000414700 REXO1Q8N1G1 1221 aaKnown RBP17.74■□□□□ 0.43
SHMT2-202ENST00000414700 HOMER2Q9NSB8 354 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 HOXC10Q9NYD6 342 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 CLIC4Q9Y696 253 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 TLL2Q9Y6L7 1015 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 A0A0G2JMZ2 1700 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 MEIS2O14770 477 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 GTF2A2P52657 109 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 IRX3P78415 501 aaPredicted RBP17.74■□□□□ 0.43
SHMT2-202ENST00000414700 RGMBQ6NW40 437 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 FAM177A1Q8N128 213 aaPredicted RBP17.74■□□□□ 0.43
SHMT2-202ENST00000414700 CUL5Q93034 780 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 PDLIM2Q96JY6 352 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 PTPN18Q99952 460 aa17.74■□□□□ 0.43
SHMT2-202ENST00000414700 ABT1Q9ULW3 272 aaKnown RBP17.74■□□□□ 0.43
SHMT2-202ENST00000414700 MYH7BA7E2Y1 1941 aa17.73■□□□□ 0.43
SHMT2-202ENST00000414700 BTBD19C9JJ37 291 aa17.73■□□□□ 0.43
SHMT2-202ENST00000414700 ZBED4O75132 1171 aa17.73■□□□□ 0.43
SHMT2-202ENST00000414700 ALAS1P13196 640 aa17.73■□□□□ 0.43
SHMT2-202ENST00000414700 ATP2B1P20020 1258 aa17.73■□□□□ 0.43
SHMT2-202ENST00000414700 CLK2P49760 499 aaKnown RBP17.73■□□□□ 0.43
SHMT2-202ENST00000414700 KRT85P78386 507 aa17.73■□□□□ 0.43
SHMT2-202ENST00000414700 TMEM88BA6NKF7 163 aa17.72■□□□□ 0.43
SHMT2-202ENST00000414700 NFIBO00712 420 aa17.72■□□□□ 0.43
SHMT2-202ENST00000414700 CYP2C8P10632 490 aa17.72■□□□□ 0.43
SHMT2-202ENST00000414700 CETPP11597 493 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms