RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 ICAM1P05362 532 aa18.29■□□□□ 0.52
ACTB-202ENST00000414620 PTGS1P23219 599 aa18.29■□□□□ 0.52
ACTB-202ENST00000414620 ITGB8P26012 769 aa18.29■□□□□ 0.52
ACTB-202ENST00000414620 C9orf50Q5SZB4 431 aa18.29■□□□□ 0.52
ACTB-202ENST00000414620 CCSAPQ6IQ19 270 aaPredicted RBP18.29■□□□□ 0.52
ACTB-202ENST00000414620 NOL8Q76FK4 1167 aaKnown RBP18.29■□□□□ 0.52
ACTB-202ENST00000414620 EEPD1Q7L9B9 569 aa18.29■□□□□ 0.52
ACTB-202ENST00000414620 DEFB123Q8N688 67 aa18.29■□□□□ 0.52
ACTB-202ENST00000414620 RNF41Q9H4P4 317 aaPredicted RBP18.29■□□□□ 0.52
ACTB-202ENST00000414620 CYP39A1Q9NYL5 469 aa18.29■□□□□ 0.52
ACTB-202ENST00000414620 LAMA3Q16787 3333 aa18.29■□□□□ 0.52
ACTB-202ENST00000414620 MOXD2PA6NHM9 499 aa18.28■□□□□ 0.52
ACTB-202ENST00000414620 ASB14A6NK59 587 aa18.28■□□□□ 0.52
ACTB-202ENST00000414620 PCP11498 1178 aaKnown RBP18.28■□□□□ 0.52
ACTB-202ENST00000414620 PDE4AP27815 886 aa18.28■□□□□ 0.52
ACTB-202ENST00000414620 SHHQ15465 462 aa18.28■□□□□ 0.52
ACTB-202ENST00000414620 BTNL9Q6UXG8 535 aa18.28■□□□□ 0.52
ACTB-202ENST00000414620 FBXO16Q8IX29 292 aaPredicted RBP18.28■□□□□ 0.52
ACTB-202ENST00000414620 NUP133Q8WUM0 1156 aa18.28■□□□□ 0.52
ACTB-202ENST00000414620 ESR2Q92731 530 aa18.28■□□□□ 0.52
ACTB-202ENST00000414620 UPF3AQ9H1J1 476 aaKnown RBP18.28■□□□□ 0.52
ACTB-202ENST00000414620 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
ACTB-202ENST00000414620 B4E1Z4 1266 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 HIP1O00291 1037 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 NFIBO00712 420 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 ASGR1P07306 291 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 GOLGA8HP0CJ92 632 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 CST5P28325 142 aaPredicted RBP18.27■□□□□ 0.52
ACTB-202ENST00000414620 GJA9P57773 515 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 BEX3Q00994 111 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 TNFAIP2Q03169 654 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 ZNF543Q08ER8 600 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 VTI1AQ96AJ9 217 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 GLT1D1Q96MS3 346 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 IL25Q9H293 177 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 CPVLQ9H3G5 476 aa18.27■□□□□ 0.52
ACTB-202ENST00000414620 PTPDC1A2A3K4 754 aa18.26■□□□□ 0.51
ACTB-202ENST00000414620 KDM4AO75164 1064 aa18.26■□□□□ 0.51
ACTB-202ENST00000414620 RAG1P15918 1043 aa18.26■□□□□ 0.51
ACTB-202ENST00000414620 BAATQ14032 418 aaPredicted RBP18.26■□□□□ 0.51
ACTB-202ENST00000414620 GNASQ5JWF2 1037 aa18.26■□□□□ 0.51
ACTB-202ENST00000414620 GPR153Q6NV75 609 aa18.26■□□□□ 0.51
ACTB-202ENST00000414620 SLC30A10Q6XR72 485 aa18.26■□□□□ 0.51
ACTB-202ENST00000414620 PCSK9Q8NBP7 692 aaKnown RBP18.26■□□□□ 0.51
ACTB-202ENST00000414620 TTC14Q96N46 770 aa18.26■□□□□ 0.51
ACTB-202ENST00000414620 PDGFCQ9NRA1 345 aa18.26■□□□□ 0.51
ACTB-202ENST00000414620 TMEM39AQ9NV64 488 aa18.26■□□□□ 0.51
ACTB-202ENST00000414620 CTAGE5O15320 804 aa18.25■□□□□ 0.51
ACTB-202ENST00000414620 GSPT1P15170 499 aaKnown RBP18.25■□□□□ 0.51
ACTB-202ENST00000414620 FAAP100Q0VG06 881 aa18.25■□□□□ 0.51
ACTB-202ENST00000414620 TMEM63BQ5T3F8 832 aa18.25■□□□□ 0.51
ACTB-202ENST00000414620 TLK2Q86UE8 772 aa18.25■□□□□ 0.51
ACTB-202ENST00000414620 DSCC1Q9BVC3 393 aa18.25■□□□□ 0.51
ACTB-202ENST00000414620 DCDC2CA8MYV0 355 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 KIAA0355O15063 1070 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 SNHG28P0DPA3 235 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 SMPD1P17405 629 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 CALML3P27482 149 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 ALDH5A1P51649 535 aaPredicted RBP18.24■□□□□ 0.51
ACTB-202ENST00000414620 IMMTQ16891 758 aaKnown RBP18.24■□□□□ 0.51
ACTB-202ENST00000414620 TTC22Q5TAA0 569 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 ANKRD33Q7Z3H0 272 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 FAM161BQ96MY7 647 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 UBA5Q9GZZ9 404 aa18.24■□□□□ 0.51
ACTB-202ENST00000414620 GNEQ9Y223 722 aaKnown RBP18.24■□□□□ 0.51
ACTB-202ENST00000414620 A0A0U1RQG5 324 aaPredicted RBP18.23■□□□□ 0.51
ACTB-202ENST00000414620 EPHB4P54760 987 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 USH1GQ495M9 461 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 PNMA1Q8ND90 353 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 CLEC4DQ8WXI8 215 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 KAT14Q9H8E8 782 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 MTMR10Q9NXD2 777 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 KIAA1217Q5T5P2 1943 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 ELP1O95163 1332 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 TNKSO95271 1327 aa18.23■□□□□ 0.51
ACTB-202ENST00000414620 DYNC1LI2O43237 492 aaPredicted RBP18.22■□□□□ 0.51
ACTB-202ENST00000414620 CXCL17Q6UXB2 119 aa18.22■□□□□ 0.51
ACTB-202ENST00000414620 RNF207Q6ZRF8 634 aa18.22■□□□□ 0.51
ACTB-202ENST00000414620 KIAA1211Q6ZU35 1233 aa18.22■□□□□ 0.51
ACTB-202ENST00000414620 DGKHQ86XP1 1220 aa18.22■□□□□ 0.51
ACTB-202ENST00000414620 TOX2Q96NM4 488 aa18.22■□□□□ 0.51
ACTB-202ENST00000414620 ZSCAN10Q96SZ4 725 aaPredicted RBP18.22■□□□□ 0.51
ACTB-202ENST00000414620 AP5M1Q9H0R1 490 aa18.22■□□□□ 0.51
ACTB-202ENST00000414620 VTA1Q9NP79 307 aa18.22■□□□□ 0.51
ACTB-202ENST00000414620 ADD3Q9UEY8 706 aaKnown RBP18.22■□□□□ 0.51
ACTB-202ENST00000414620 MROH7Q68CQ1 1323 aa18.22■□□□□ 0.51
ACTB-202ENST00000414620 GBF1Q92538 1859 aa18.21■□□□□ 0.51
ACTB-202ENST00000414620 ARVCFO00192 962 aa18.21■□□□□ 0.51
ACTB-202ENST00000414620 FPGSQ05932 587 aa18.21■□□□□ 0.51
ACTB-202ENST00000414620 CDC37Q16543 378 aaPredicted RBP18.21■□□□□ 0.51
ACTB-202ENST00000414620 FSCN1Q16658 493 aaKnown RBP18.21■□□□□ 0.51
ACTB-202ENST00000414620 GPATCH4Q5T3I0 446 aaKnown RBP18.21■□□□□ 0.51
ACTB-202ENST00000414620 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
ACTB-202ENST00000414620 MORC4Q8TE76 937 aa18.21■□□□□ 0.51
ACTB-202ENST00000414620 RNPC3Q96LT9 517 aaKnown RBP18.21■□□□□ 0.51
ACTB-202ENST00000414620 ZSWIM5Q9P217 1185 aa18.21■□□□□ 0.51
ACTB-202ENST00000414620 CTNNA3Q9UI47 895 aa18.21■□□□□ 0.51
ACTB-202ENST00000414620 TBX21Q9UL17 535 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms