RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MYL1P05976 194 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 TMEM191BP0C7N4 346 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 EVCP57679 992 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 CEP63Q96MT8 703 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 POLR3EQ9NVU0 708 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 LRRIQ4A6NIV6 560 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 HLFQ16534 295 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 SYMPKQ92797 1274 aaKnown RBP19.03■□□□□ 0.64
PHRF1-202ENST00000413872 GJD4Q96KN9 370 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-202ENST00000413872 FAM193BQ96PV7 902 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-202ENST00000413872 IFIH1Q9BYX4 1025 aaKnown RBP19.03■□□□□ 0.64
PHRF1-202ENST00000413872 PNMA3Q9UL41 463 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 PRPF3O43395 683 aaKnown RBP19.03■□□□□ 0.64
PHRF1-202ENST00000413872 CYP19A1P11511 503 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-202ENST00000413872 ADCK5Q3MIX3 580 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 UBLCP1Q8WVY7 318 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-202ENST00000413872 NLRC4Q9NPP4 1024 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 HESX1Q9UBX0 185 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 MED14O60244 1454 aa19.03■□□□□ 0.64
PHRF1-202ENST00000413872 CCND2P30279 289 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 SPATA1Q5VX52 437 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 MIS18BP1Q6P0N0 1132 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 KCTD1Q719H9 257 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.64
PHRF1-202ENST00000413872 STK17AQ9UEE5 414 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 RASA3Q14644 834 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 PRKAB2O43741 272 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 CEP104O60308 925 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 ZEB2O60315 1214 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 CFAP221Q4G0U5 840 aa19.02■□□□□ 0.64
PHRF1-202ENST00000413872 LARP4BQ92615 738 aaKnown RBP19.02■□□□□ 0.64
PHRF1-202ENST00000413872 DIXDC1Q155Q3 683 aa19.02■□□□□ 0.63
PHRF1-202ENST00000413872 ODR4Q5SWX8 454 aa19.02■□□□□ 0.63
PHRF1-202ENST00000413872 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.63
PHRF1-202ENST00000413872 PIH1D3Q9NQM4 214 aaKnown RBP19.02■□□□□ 0.63
PHRF1-202ENST00000413872 USTQ9Y2C2 406 aa19.02■□□□□ 0.63
PHRF1-202ENST00000413872 TRPM1Q7Z4N2 1603 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 ADAM9Q13443 819 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 NACC1Q96RE7 527 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 TRIM7Q9C029 511 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 ODF2LQ9ULJ1 636 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 KIAA1024Q9UPX6 916 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 ABCC12Q96J65 1359 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 LMTK2Q8IWU2 1503 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 POLR2BP30876 1174 aaKnown RBP19.01■□□□□ 0.63
PHRF1-202ENST00000413872 PPP2R5EQ16537 467 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 TIGD1Q96MW7 591 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 KCNK9Q9NPC2 374 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 PI16Q6UXB8 463 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 RPGRIP1Q96KN7 1286 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 CDK8P49336 464 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 PLCD3Q8N3E9 789 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 XPO4Q9C0E2 1151 aaKnown RBP19.01■□□□□ 0.63
PHRF1-202ENST00000413872 ASIC3Q9UHC3 531 aa19.01■□□□□ 0.63
PHRF1-202ENST00000413872 BPIFB4P59827 614 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 TAOK1Q7L7X3 1001 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 PKNOX2Q96KN3 472 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 PIGSQ96S52 555 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 CROCC2H7BZ55 1655 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 IGKV5-2P06315 115 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 CYP4A11Q02928 519 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 CFAP157Q5JU67 520 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 ZNF710Q8N1W2 664 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 AMFRQ9UKV5 643 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 C21orf2O43822 256 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 RNF169Q8NCN4 708 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 PROCA1Q8NCQ7 364 aaPredicted RBP19■□□□□ 0.63
PHRF1-202ENST00000413872 FAM81BQ96LP2 452 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 NOL12Q9UGY1 213 aaKnown RBP eCLIP19■□□□□ 0.63
PHRF1-202ENST00000413872 MINPP1Q9UNW1 487 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 V9GYY5 206 aaPredicted RBP19■□□□□ 0.63
PHRF1-202ENST00000413872 SPATA31A6Q5VVP1 1343 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 SMIM23A6NLE4 172 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 TERF1P54274 439 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 TYW1BQ6NUM6 668 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 SLF1Q9BQI6 1058 aa19■□□□□ 0.63
PHRF1-202ENST00000413872 LGSNQ5TDP6 509 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 HADHQ16836 314 aaKnown RBP18.99■□□□□ 0.63
PHRF1-202ENST00000413872 STRBPQ96SI9 672 aaKnown RBP18.99■□□□□ 0.63
PHRF1-202ENST00000413872 ZSWIM5Q9P217 1185 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 SEPT9Q9UHD8 586 aaPredicted RBP18.99■□□□□ 0.63
PHRF1-202ENST00000413872 SETBP1Q9Y6X0 1596 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 MMP1P03956 469 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 PDE6CP51160 858 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 MAP7D1Q3KQU3 841 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 CPLX4Q7Z7G2 160 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.99■□□□□ 0.63
PHRF1-202ENST00000413872 PNMA6FA0A0J9YX94 578 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 LRMPQ12912 555 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 TRIM28Q13263 835 aaKnown RBP18.99■□□□□ 0.63
PHRF1-202ENST00000413872 PPP1R21Q6ZMI0 780 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 TRIM58Q8NG06 486 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 GIMAP7Q8NHV1 300 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 TBCKQ8TEA7 893 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 U2AF1L4Q8WU68 220 aaKnown RBP18.99■□□□□ 0.63
PHRF1-202ENST00000413872 DCAF4Q8WV16 495 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 POMGNT1Q8WZA1 660 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 RPS6KC1Q96S38 1066 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 ST7Q9NRC1 585 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 TMEM63CQ9P1W3 806 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms