RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 FSCN1Q16658 493 aaKnown RBP11.43□□□□□ -0.58
RFFL-203ENST00000413582 AAK1Q2M2I8 961 aa11.43□□□□□ -0.58
RFFL-203ENST00000413582 SBK1Q52WX2 424 aa11.43□□□□□ -0.58
RFFL-203ENST00000413582 AGBL1Q96MI9 1066 aa11.43□□□□□ -0.58
RFFL-203ENST00000413582 TRPV6Q9H1D0 765 aa11.43□□□□□ -0.58
RFFL-203ENST00000413582 A1CFQ9NQ94 594 aaKnown RBP11.43□□□□□ -0.58
RFFL-203ENST00000413582 FEM1BQ9UK73 627 aa11.43□□□□□ -0.58
RFFL-203ENST00000413582 CTDP1Q9Y5B0 961 aaPredicted RBP11.43□□□□□ -0.58
RFFL-203ENST00000413582 TET1Q8NFU7 2136 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 PLIN4Q96Q06 1357 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 EPOPA6NHQ4 379 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 ZBBXA8MT70 800 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 SMPD1P17405 629 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 POU3F3P20264 500 aaPredicted RBP11.42□□□□□ -0.58
RFFL-203ENST00000413582 PSMC6P62333 389 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 TTLL4Q14679 1199 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 SKIV2LQ15477 1246 aaKnown RBP11.42□□□□□ -0.58
RFFL-203ENST00000413582 NOL8Q76FK4 1167 aaKnown RBP11.42□□□□□ -0.58
RFFL-203ENST00000413582 RPUSD2Q8IZ73 545 aaKnown RBP11.42□□□□□ -0.58
RFFL-203ENST00000413582 LRRC47Q8N1G4 583 aaKnown RBP11.42□□□□□ -0.58
RFFL-203ENST00000413582 GMCL1P1Q8NEA9 526 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 PANK1Q8TE04 598 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 CEP95Q96GE4 821 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 SCLYQ96I15 445 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 SEZ6LQ9BYH1 1024 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 BCL11AQ9H165 835 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 ACAD9Q9H845 621 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 CLIP2Q9UDT6 1046 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 SYNPO2Q9UMS6 1093 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 ARIH1Q9Y4X5 557 aaPredicted RBP11.42□□□□□ -0.58
RFFL-203ENST00000413582 MTCH2Q9Y6C9 303 aa11.42□□□□□ -0.58
RFFL-203ENST00000413582 DDX49Q9Y6V7 483 aaKnown RBP11.42□□□□□ -0.58
RFFL-203ENST00000413582 ZNF536O15090 1300 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 PTPRSQ13332 1948 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 GSG1L2A8MUP6 293 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 RFXAPO00287 272 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 CA3P07451 260 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 PFKMP08237 780 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 GIMAP6Q6P9H5 292 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 FBXO16Q8IX29 292 aaPredicted RBP11.41□□□□□ -0.58
RFFL-203ENST00000413582 SIRT2Q8IXJ6 389 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 STK11IPQ8N1F8 1099 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 MKL1Q969V6 931 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 STRBPQ96SI9 672 aaKnown RBP11.41□□□□□ -0.58
RFFL-203ENST00000413582 LRFN3Q9BTN0 628 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 ALDH8A1Q9H2A2 487 aaPredicted RBP11.41□□□□□ -0.58
RFFL-203ENST00000413582 EPHX3Q9H6B9 360 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 MKNK2Q9HBH9 465 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 EPB41L4AQ9HCS5 686 aaPredicted RBP11.41□□□□□ -0.58
RFFL-203ENST00000413582 PDGFCQ9NRA1 345 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 RNF146Q9NTX7 359 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 MTMR4Q9NYA4 1195 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 HCN4Q9Y3Q4 1203 aa11.41□□□□□ -0.58
RFFL-203ENST00000413582 ASB14A6NK59 587 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 DYNC1LI2O43237 492 aaPredicted RBP11.4□□□□□ -0.58
RFFL-203ENST00000413582 GTPBP6O43824 516 aaPredicted RBP11.4□□□□□ -0.58
RFFL-203ENST00000413582 ZEB2O60315 1214 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 RAB11FIP3O75154 756 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 ARHGEF15O94989 841 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 TMEM67Q5HYA8 995 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 TMEM63BQ5T3F8 832 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 KRT40Q6A162 431 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 TAPT1Q6NXT6 567 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 RPAP2Q8IXW5 612 aaPredicted RBP11.4□□□□□ -0.58
RFFL-203ENST00000413582 COG6Q9Y2V7 657 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 Q9Y3F1 56 aa11.4□□□□□ -0.58
RFFL-203ENST00000413582 MINDY4BA8MYZ0 360 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 HMMRO75330 724 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 PRDM1O75626 825 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 TTLL1O95922 423 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 FDX1P10109 184 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 CYP2C9P11712 490 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 BMP3P12645 472 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 STAT2P52630 851 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 SLFN13Q68D06 897 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 ZSCAN25Q6NSZ9 544 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 EEPD1Q7L9B9 569 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 CERS4Q9HA82 394 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 C11orf16Q9NQ32 467 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 TRMT13Q9NUP7 481 aaKnown RBP11.39□□□□□ -0.59
RFFL-203ENST00000413582 COG5Q9UP83 839 aa11.39□□□□□ -0.59
RFFL-203ENST00000413582 TNKSO95271 1327 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 TMEM232C9JQI7 657 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 TLL1O43897 1013 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 TAP1Q03518 808 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 TKFCQ3LXA3 575 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 TMEM31Q5JXX7 168 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 IQSEC1Q6DN90 963 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 DEFB128Q7Z7B8 93 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 MORC4Q8TE76 937 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 KHSRPQ92945 711 aaKnown RBP eCLIP11.38□□□□□ -0.59
RFFL-203ENST00000413582 OSBP2Q969R2 916 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 TRERF1Q96PN7 1200 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 SLC9A7Q96T83 725 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 VTA1Q9NP79 307 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 CYP39A1Q9NYL5 469 aa11.38□□□□□ -0.59
RFFL-203ENST00000413582 TRIP12Q14669 1992 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms