RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 PRR5LQ6MZQ0 368 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 CLEC4GQ6UXB4 293 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 C2CD5Q86YS7 1000 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 CCDC146Q8IYE0 955 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 PLD6Q8N2A8 252 aaKnown RBP6.82□□□□□ -1.32
LINC00342-201ENST00000412393 TTLL6Q8N841 843 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 HRASLS5Q96KN8 279 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 ZNF652Q9Y2D9 606 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 RRP7AQ9Y3A4 280 aaKnown RBP6.82□□□□□ -1.32
LINC00342-201ENST00000412393 SLX4Q8IY92 1834 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 ZNF865P0CJ78 1059 aaPredicted RBP6.81□□□□□ -1.32
LINC00342-201ENST00000412393 PDE6BP35913 854 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 ST5P78524 1137 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 PEAR1Q5VY43 1037 aaPredicted RBP6.81□□□□□ -1.32
LINC00342-201ENST00000412393 C9orf131Q5VYM1 1079 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 NGEFQ8N5V2 710 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 CNBD1Q8NA66 436 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 RUNDC1Q96C34 613 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 BRIP1Q9BX63 1249 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 PPP4R2Q9NY27 417 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 TSPYL4Q9UJ04 414 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 ANKRD36CQ5JPF3 1778 aa6.81□□□□□ -1.32
LINC00342-201ENST00000412393 A0A096LPE4 126 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 A0A1W2PPZ6 126 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 DYNC1LI2O43237 492 aaPredicted RBP6.8□□□□□ -1.32
LINC00342-201ENST00000412393 AOC2O75106 756 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 MYL6BP14649 208 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 CFPP27918 469 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 KCNMB1Q16558 191 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 NBPF5PQ86XG9 351 aaPredicted RBP6.8□□□□□ -1.32
LINC00342-201ENST00000412393 CCNJLQ8IV13 435 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 TIAM2Q8IVF5 1701 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 ZNF622Q969S3 477 aaKnown RBP eCLIP6.8□□□□□ -1.32
LINC00342-201ENST00000412393 BABAM1Q9NWV8 329 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 RNF181Q9P0P0 153 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 NIP7Q9Y221 180 aaKnown RBP eCLIP6.8□□□□□ -1.32
LINC00342-201ENST00000412393 SNX11Q9Y5W9 270 aa6.8□□□□□ -1.32
LINC00342-201ENST00000412393 ERVV-1B6SEH8 477 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 B8ZZF3 427 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 B3GALT4O96024 378 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 EIF2S2P20042 333 aaKnown RBP6.79□□□□□ -1.32
LINC00342-201ENST00000412393 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 HLFQ16534 295 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 AOC3Q16853 763 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 ZNF423Q2M1K9 1284 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 TPTE2Q6XPS3 522 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 KIF6Q6ZMV9 814 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
LINC00342-201ENST00000412393 LRRC56Q8IYG6 542 aaPredicted RBP6.79□□□□□ -1.32
LINC00342-201ENST00000412393 TNRC6CQ9HCJ0 1690 aaKnown RBP6.79□□□□□ -1.32
LINC00342-201ENST00000412393 MAP3K15Q6ZN16 1313 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 CHL1O00533 1208 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 CEACAM5P06731 702 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 FAM87AP0C7U9 286 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 SRGNP10124 158 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 LMNB1P20700 586 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 EIF1AXP47813 144 aaKnown RBP6.78□□□□□ -1.32
LINC00342-201ENST00000412393 TMEM164Q5U3C3 297 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 STYK1Q6J9G0 422 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 C1QL4Q86Z23 238 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 MASTLQ96GX5 879 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 ATXN3LQ9H3M9 355 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 SEPT3Q9UH03 358 aa6.78□□□□□ -1.32
LINC00342-201ENST00000412393 LAS1LQ9Y4W2 734 aaKnown RBP6.78□□□□□ -1.32
LINC00342-201ENST00000412393 RNF123Q5XPI4 1314 aa6.77□□□□□ -1.32
LINC00342-201ENST00000412393 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
LINC00342-201ENST00000412393 ZNF503-AS2A6NEH8 195 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 A6NHS1 94 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 APAF1O14727 1248 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 ANXA1P04083 346 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 CTSBP07858 339 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 NPR1P16066 1061 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 GPTP24298 496 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 MLANAQ16655 118 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 PRPF40BQ6NWY9 871 aaKnown RBP6.77□□□□□ -1.33
LINC00342-201ENST00000412393 FAM181AQ8N9Y4 354 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 WDR18Q9BV38 432 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 NYXQ9GZU5 481 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 PIDD1Q9HB75 910 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 NMRK2Q9NPI5 230 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC00342-201ENST00000412393 LAMB2P55268 1798 aa6.77□□□□□ -1.33
LINC00342-201ENST00000412393 KLRG2A4D1S0 409 aaPredicted RBP6.76□□□□□ -1.33
LINC00342-201ENST00000412393 TOMM70O94826 608 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 SLFN14P0C7P3 912 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 ZSCAN22P10073 491 aaPredicted RBP6.76□□□□□ -1.33
LINC00342-201ENST00000412393 ATP2B4P23634 1241 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 AFMP43652 599 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 PRELPP51888 382 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 KRT24Q2M2I5 525 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 PROSER3Q2NL68 480 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 CCDC184Q52MB2 194 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 SOGA3Q5TF21 947 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 LCNL1Q6ZST4 164 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 TTLL10Q6ZVT0 673 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 LRP10Q7Z4F1 713 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 ZNF34Q8IZ26 560 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 ASB11Q8WXH4 323 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 TRIM56Q9BRZ2 755 aaKnown RBP6.76□□□□□ -1.33
LINC00342-201ENST00000412393 DDX21Q9NR30 783 aaKnown RBP eCLIP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms