RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GSTT2P0CG29 244 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 GSTT2BP0CG30 244 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 GPSM2P81274 684 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 KLC1Q07866 573 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 BIRC3Q13489 604 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 LAPTM5Q13571 262 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 CASP8Q14790 479 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 IMMTQ16891 758 aaKnown RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 P3H1Q32P28 736 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 CCDC122Q5T0U0 273 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 LMBRD2Q68DH5 695 aaPredicted RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 EGLN2Q96KS0 407 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 HAUS7Q99871 368 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 GBP3Q9H0R5 595 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 MRGBPQ9NV56 204 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 STK39Q9UEW8 545 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 ABCA8O94911 1581 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 POTEFA5A3E0 1075 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 STXBP3O00186 592 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 N4BP3O15049 544 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 WDR46O15213 610 aaKnown RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 DIAPH1O60610 1272 aaKnown RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 PFDN1O60925 122 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 ZNF254O75437 659 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 SSBP05455 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
HERC4-205ENST00000412272 LDHCP07864 332 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 POTEIP0CG38 1075 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 NEK4P51957 841 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 WDR93Q6P2C0 686 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 IGSF22Q8N9C0 903 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 LINS1Q8NG48 757 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 LEO1Q8WVC0 666 aaPredicted RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 C8orf48Q96LL4 319 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 FNBP1Q96RU3 617 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 EIF2AQ9BY44 585 aaKnown RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 GLT8D2Q9H1C3 349 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 TPK1Q9H3S4 243 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 ANKZF1Q9H8Y5 726 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 NDFIP2Q9NV92 336 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 SUCLA2Q9P2R7 463 aaPredicted RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 PCSK1NQ9UHG2 260 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 ZNF777Q9ULD5 760 aaPredicted RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 MTMR6Q9Y217 621 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 ZNF536O15090 1300 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 ELL2O00472 640 aaPredicted RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 POLD2P49005 469 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 XRCC4Q13426 336 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 ATL3Q6DD88 541 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 ALKBH2Q6NS38 261 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 DHX40Q8IX18 779 aaKnown RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 CNBD1Q8NA66 436 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 ZNF75CPQ92670 426 aaPredicted RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 AZIN2Q96A70 460 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 KIFC2Q96AC6 838 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 HAUS2Q9NVX0 235 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 PCDHB2Q9Y5E7 798 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 LRRC7Q96NW7 1537 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 CASZ1Q86V15 1759 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 CPSF1Q10570 1443 aaKnown RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 LUC7L3O95232 432 aaKnown RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 SKIP12755 728 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 HSPA4P34932 840 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 PIK3CAP42336 1068 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 ZNF165P49910 485 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 GPC3P51654 580 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 MTTPP55157 894 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 MXRA7P84157 204 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 MEX3CQ5U5Q3 659 aaKnown RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 FOXB2Q5VYV0 432 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 FAM173BQ6P4H8 233 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 C6orf89Q6UWU4 347 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 EPSTI1Q96J88 318 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 VPS50Q96JG6 964 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 C8orf76Q96K31 380 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 ESYT1Q9BSJ8 1104 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 GDPD2Q9HCC8 539 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 HSFX1Q9UBD0 423 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 TRIM35Q9UPQ4 493 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 SYCP2Q9BX26 1530 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 ADCY9O60503 1353 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 LRRD1A4D1F6 860 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 ZNF202O95125 648 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 KRT14P02533 472 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 EXOSC9Q06265 439 aaKnown RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 MUM1Q2TAK8 710 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 CAPN12Q6ZSI9 719 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 ARHGEF18Q6ZSZ5 1173 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 SRGAP1Q7Z6B7 1085 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 MCF2L2Q86YR7 1114 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 TEX9Q8N6V9 391 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.77□□□□□ -1.492e-6■□□□□ 10.9
HERC4-205ENST00000412272 CDHR1Q96JP9 859 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 GPR101Q96P66 508 aaPredicted RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 CARD14Q9BXL6 1004 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 XPO4Q9C0E2 1151 aaKnown RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 ABCB6Q9NP58 842 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 XPO7Q9UIA9 1087 aaKnown RBP5.77□□□□□ -1.49
HERC4-205ENST00000412272 GTF3C4Q9UKN8 822 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 CCPG1Q9ULG6 757 aa5.77□□□□□ -1.49
HERC4-205ENST00000412272 POLR2FP61218 127 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms