RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 VIPR1P32241 457 aa7.66□□□□□ -1.18
HDAC9-205ENST00000411993 RAB3GAP1Q15042 981 aa7.66□□□□□ -1.18
HDAC9-205ENST00000411993 KIAA1211LQ6NV74 962 aa7.66□□□□□ -1.18
HDAC9-205ENST00000411993 SPOCD1Q6ZMY3 1216 aa7.66□□□□□ -1.18
HDAC9-205ENST00000411993 VPS37DQ86XT2 251 aa7.66□□□□□ -1.18
HDAC9-205ENST00000411993 FAM169BQ8N8A8 192 aa7.66□□□□□ -1.18
HDAC9-205ENST00000411993 KLHL6Q8WZ60 621 aa7.66□□□□□ -1.18
HDAC9-205ENST00000411993 PTCHD1Q96NR3 888 aa7.66□□□□□ -1.18
HDAC9-205ENST00000411993 CNOT6Q9ULM6 557 aaKnown RBP7.66□□□□□ -1.18
HDAC9-205ENST00000411993 STXBP3O00186 592 aa7.65□□□□□ -1.18
HDAC9-205ENST00000411993 SSBP05455 408 aaKnown RBP eCLIP7.65□□□□□ -1.18
HDAC9-205ENST00000411993 TCF3P15923 654 aa7.65□□□□□ -1.18
HDAC9-205ENST00000411993 ATF4P18848 351 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-205ENST00000411993 GNL2Q13823 731 aaKnown RBP7.65□□□□□ -1.18
HDAC9-205ENST00000411993 DPY19L1Q2PZI1 675 aa7.65□□□□□ -1.18
HDAC9-205ENST00000411993 GCM1Q9NP62 436 aa7.65□□□□□ -1.18
HDAC9-205ENST00000411993 TNFRSF12AQ9NP84 129 aa7.65□□□□□ -1.18
HDAC9-205ENST00000411993 CGGBP1Q9UFW8 167 aaPredicted RBP7.65□□□□□ -1.18
HDAC9-205ENST00000411993 RFXAPO00287 272 aa7.64□□□□□ -1.19
HDAC9-205ENST00000411993 YBX1P67809 324 aaKnown RBP7.64□□□□□ -1.19
HDAC9-205ENST00000411993 AMPD2Q01433 879 aa7.64□□□□□ -1.19
HDAC9-205ENST00000411993 RCSD1Q6JBY9 416 aa7.64□□□□□ -1.19
HDAC9-205ENST00000411993 TMC6Q7Z403 805 aa7.64□□□□□ -1.19
HDAC9-205ENST00000411993 IRF2BPLQ9H1B7 796 aa7.64□□□□□ -1.19
HDAC9-205ENST00000411993 KLHL14Q9P2G3 628 aa7.64□□□□□ -1.19
HDAC9-205ENST00000411993 MBD1Q9UIS9 605 aaPredicted RBP7.64□□□□□ -1.19
HDAC9-205ENST00000411993 ANKRD34BA5PLL1 514 aa7.63□□□□□ -1.19
HDAC9-205ENST00000411993 VAMP4O75379 141 aa7.63□□□□□ -1.19
HDAC9-205ENST00000411993 NAT2P11245 290 aa7.63□□□□□ -1.19
HDAC9-205ENST00000411993 SEPHS1P49903 392 aa7.63□□□□□ -1.19
HDAC9-205ENST00000411993 MVKQ03426 396 aa7.63□□□□□ -1.19
HDAC9-205ENST00000411993 EEF1DP3Q658K8 133 aa7.63□□□□□ -1.19
HDAC9-205ENST00000411993 LCNL1Q6ZST4 164 aa7.63□□□□□ -1.19
HDAC9-205ENST00000411993 AURKAO14965 403 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 MSL3P1P0C860 447 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 L1CAMP32004 1257 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 EPHB3P54753 998 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 GRB10Q13322 594 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 FBLN7Q53RD9 439 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 ZNF385BQ569K4 471 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 BICRALQ6AI39 1079 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 SIAH1Q8IUQ4 282 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 ARHGEF39Q8N4T4 335 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 ZNF428Q96B54 188 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 RCC1LQ96I51 464 aaKnown RBP7.62□□□□□ -1.19
HDAC9-205ENST00000411993 MCMBPQ9BTE3 642 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 AKT3Q9Y243 479 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 KCTD3Q9Y597 815 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 BACE2Q9Y5Z0 518 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 IRAK3Q9Y616 596 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 MRVI1Q9Y6F6 885 aa7.62□□□□□ -1.19
HDAC9-205ENST00000411993 TACR1P25103 407 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 NR1I3Q14994 352 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 NCAPHQ15003 741 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 RPTNQ6XPR3 784 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 CRACR2BQ8N4Y2 399 aaPredicted RBP7.61□□□□□ -1.19
HDAC9-205ENST00000411993 PPP1R14AQ96A00 147 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 SIGLEC10Q96LC7 697 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 APBA2Q99767 749 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 CNTD2Q9H8S5 307 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 PDLIM7Q9NR12 457 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 ACTR10Q9NZ32 417 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 SUSD2Q9UGT4 822 aa7.61□□□□□ -1.19
HDAC9-205ENST00000411993 N4BP3O15049 544 aa7.6□□□□□ -1.19
HDAC9-205ENST00000411993 SMAD7O15105 426 aaKnown RBP7.6□□□□□ -1.19
HDAC9-205ENST00000411993 PI3P19957 117 aa7.6□□□□□ -1.19
HDAC9-205ENST00000411993 RBM25P49756 843 aaKnown RBP7.6□□□□□ -1.19
HDAC9-205ENST00000411993 CDR1P51861 262 aa7.6□□□□□ -1.19
HDAC9-205ENST00000411993 CORO7P57737 925 aa7.6□□□□□ -1.19
HDAC9-205ENST00000411993 SSPNQ14714 243 aa7.6□□□□□ -1.19
HDAC9-205ENST00000411993 PLEKHN1Q494U1 663 aaPredicted RBP7.6□□□□□ -1.19
HDAC9-205ENST00000411993 TNNI3KQ59H18 835 aa7.6□□□□□ -1.19
HDAC9-205ENST00000411993 LARP1BQ659C4 914 aaKnown RBP7.6□□□□□ -1.19
HDAC9-205ENST00000411993 ZC3H14Q6PJT7 736 aaKnown RBP7.6□□□□□ -1.19
HDAC9-205ENST00000411993 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.6□□□□□ -1.19
HDAC9-205ENST00000411993 APEX2Q9UBZ4 518 aa7.6□□□□□ -1.19
HDAC9-205ENST00000411993 C2orf71A6NGG8 1288 aa7.59□□□□□ -1.19
HDAC9-205ENST00000411993 NOP56O00567 594 aaKnown RBP7.59□□□□□ -1.19
HDAC9-205ENST00000411993 KCNH1O95259 989 aa7.59□□□□□ -1.19
HDAC9-205ENST00000411993 MAPKAPK2P49137 400 aa7.59□□□□□ -1.19
HDAC9-205ENST00000411993 ZNF143P52747 638 aaPredicted RBP7.59□□□□□ -1.19
HDAC9-205ENST00000411993 CBX2Q14781 532 aaPredicted RBP7.59□□□□□ -1.19
HDAC9-205ENST00000411993 POMZP3Q6PJE2 187 aa7.59□□□□□ -1.19
HDAC9-205ENST00000411993 AMIGO3Q86WK7 504 aa7.59□□□□□ -1.19
HDAC9-205ENST00000411993 MZB1Q8WU39 189 aa7.59□□□□□ -1.19
HDAC9-205ENST00000411993 SRGAP3O43295 1099 aa7.58□□□□□ -1.2
HDAC9-205ENST00000411993 CYBBP04839 570 aa7.58□□□□□ -1.2
HDAC9-205ENST00000411993 DBHP09172 617 aa7.58□□□□□ -1.2
HDAC9-205ENST00000411993 PAQR3Q6TCH7 311 aa7.58□□□□□ -1.2
HDAC9-205ENST00000411993 CABP7Q86V35 215 aa7.58□□□□□ -1.2
HDAC9-205ENST00000411993 BVESQ8NE79 360 aa7.58□□□□□ -1.2
HDAC9-205ENST00000411993 DBR1Q9UK59 544 aaKnown RBP7.58□□□□□ -1.2
HDAC9-205ENST00000411993 TRBV23OR9-2A0A075B6M9 112 aa7.57□□□□□ -1.2
HDAC9-205ENST00000411993 PAMP19021 973 aa7.57□□□□□ -1.2
HDAC9-205ENST00000411993 TCERG1LQ5VWI1 586 aa7.57□□□□□ -1.2
HDAC9-205ENST00000411993 C6orf15Q6UXA7 325 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-205ENST00000411993 LDHDQ86WU2 507 aa7.57□□□□□ -1.2
HDAC9-205ENST00000411993 TMEM151BQ8IW70 566 aa7.57□□□□□ -1.2
HDAC9-205ENST00000411993 EMC9Q9Y3B6 208 aa7.57□□□□□ -1.2
HDAC9-205ENST00000411993 NPHP3-ACAD11A0A0J9YXS1 232 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms