RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 THSD4Q6ZMP0 1018 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 ZNF713Q8N859 430 aaPredicted RBP8.55□□□□□ -1.04
CXCR4-202ENST00000409817 DAGLBQ8NCG7 672 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 CAMKK2Q96RR4 588 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 SPSB2Q99619 263 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 EHD4Q9H223 541 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 EVA1BQ9NVM1 165 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 SAP30BPQ9UHR5 308 aaKnown RBP8.55□□□□□ -1.04
CXCR4-202ENST00000409817 MAD2L2Q9UI95 211 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 TUBE1Q9UJT0 475 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 STX8Q9UNK0 236 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 ZC3H4Q9UPT8 1303 aaKnown RBP8.55□□□□□ -1.04
CXCR4-202ENST00000409817 USP17L3A6NCW0 530 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 USP17L4A6NCW7 530 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 SMTNL1A8MU46 457 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 MYO1BO43795 1136 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 HLA-DOAP06340 250 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 CCNYL3P0C7X3 344 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 COPS2P61201 443 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 TPM4P67936 248 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 KIAA2012Q0VF49 1180 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 NPY5RQ15761 445 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 KRBA2Q6ZNG9 492 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 USP17L1Q7RTZ2 530 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 PLA2G4DQ86XP0 818 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 ZDHHC15Q96MV8 337 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 DHX36Q9H2U1 1008 aaKnown RBP8.55□□□□□ -1.04
CXCR4-202ENST00000409817 SERPINB13Q9UIV8 391 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 USTQ9Y2C2 406 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 PCDHB6Q9Y5E3 794 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 TLL1O43897 1013 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 PARP1P09874 1014 aaKnown RBP8.54□□□□□ -1.04
CXCR4-202ENST00000409817 DHX8Q14562 1220 aaKnown RBP8.54□□□□□ -1.04
CXCR4-202ENST00000409817 TTC38Q5R3I4 469 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 ARL6IP4Q66PJ3 421 aaKnown RBP8.54□□□□□ -1.04
CXCR4-202ENST00000409817 C11orf57Q6ZUT1 292 aaPredicted RBP8.54□□□□□ -1.04
CXCR4-202ENST00000409817 BLIDQ8IZY5 108 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 TRIML1Q8N9V2 468 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 SLC44A5Q8NCS7 719 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 CNNM3Q8NE01 707 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 SHISA4Q96DD7 197 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 MRFAP1L1Q96HT8 127 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 CCDC17Q96LX7 622 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 TRIM5Q9C035 493 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 OSBPL5Q9H0X9 879 aaPredicted RBP8.54□□□□□ -1.04
CXCR4-202ENST00000409817 USP40Q9NVE5 1235 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 PCDHA4Q9UN74 947 aa8.54□□□□□ -1.04
CXCR4-202ENST00000409817 TMEM88BA6NKF7 163 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 IKBKBO14920 756 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 ATG7O95352 703 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 CTHP32929 405 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 CRKP46108 304 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 ZNF75DP51815 510 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 ATP2C1P98194 919 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-202ENST00000409817 ASPRV1Q53RT3 343 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 CT47A1Q5JQC4 288 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-202ENST00000409817 MSL1Q68DK7 614 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 CLIC6Q96NY7 704 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 NUDT12Q9BQG2 462 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 BARHL2Q9NY43 387 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 IGKV6D-41A0A0C4DH26 115 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 ESYT2A0FGR8 921 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 KLRF2D3W0D1 207 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 LAD1O00515 517 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 AP5Z1O43299 807 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 ECE2O60344 883 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 GNA11P29992 359 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 KCNH2Q12809 1159 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 ORC2Q13416 577 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-202ENST00000409817 SLC4A8Q2Y0W8 1093 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 DACT2Q5SW24 774 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 NT5DC1Q5TFE4 455 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 APOBEC3HQ6NTF7 200 aaKnown RBP8.53□□□□□ -1.04
CXCR4-202ENST00000409817 CDC42EP5Q6NZY7 148 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 POTEGQ6S5H5 508 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-202ENST00000409817 DHX40Q8IX18 779 aaKnown RBP8.53□□□□□ -1.04
CXCR4-202ENST00000409817 STAG2Q8N3U4 1231 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 FAM174AQ8TBP5 190 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 SLC16A10Q8TF71 515 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 C7orf43Q8WVR3 580 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 RRP36Q96EU6 259 aaKnown RBP8.53□□□□□ -1.04
CXCR4-202ENST00000409817 CEP95Q96GE4 821 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 IDI2Q9BXS1 227 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 VPS33BQ9H267 617 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 MTMR4Q9NYA4 1195 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 SEC63Q9UGP8 760 aaKnown RBP8.53□□□□□ -1.04
CXCR4-202ENST00000409817 DACH1Q9UI36 760 aa8.53□□□□□ -1.04
CXCR4-202ENST00000409817 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
CXCR4-202ENST00000409817 SLX4Q8IY92 1834 aa8.52□□□□□ -1.05
CXCR4-202ENST00000409817 MYH8P13535 1937 aa8.52□□□□□ -1.05
CXCR4-202ENST00000409817 CCDC194A0A1B0GVG4 234 aa8.52□□□□□ -1.05
CXCR4-202ENST00000409817 hCG_1642624A0A1W2PR95 340 aa8.52□□□□□ -1.05
CXCR4-202ENST00000409817 F8W031 263 aaPredicted RBP8.52□□□□□ -1.05
CXCR4-202ENST00000409817 TTLL1O95922 423 aa8.52□□□□□ -1.05
CXCR4-202ENST00000409817 SNHG28P0DPA3 235 aa8.52□□□□□ -1.05
CXCR4-202ENST00000409817 PICALMQ13492 652 aa8.52□□□□□ -1.05
CXCR4-202ENST00000409817 EZH2Q15910 746 aaKnown RBP8.52□□□□□ -1.05
CXCR4-202ENST00000409817 LONRF3Q496Y0 759 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms