RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PDE8AO60658 829 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 DNAJC8O75937 253 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 SNUPNO95149 360 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 PYGBP11216 843 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 PECAM1P16284 738 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 PDIA3P30101 505 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 CASP7P55210 303 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 CTSWP56202 376 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 GPSM2P81274 684 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 GOLGA8FQ08AF8 430 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 GOLGA8DPQ0D2H9 430 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 MORC3Q14149 939 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 GCKRQ14397 625 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 MTF1Q14872 753 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 JDP2Q8WYK2 163 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 SAAL1Q96ER3 474 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 NFE2L3Q9Y4A8 694 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 TAF6LQ9Y6J9 622 aa11.86□□□□□ -0.51
NIF3L1-204ENST00000409357 LRRC10BA6NIK2 292 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 WTIPA6NIX2 430 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 H7C1W4 665 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 PPP1R37O75864 691 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 SASH1O94885 1247 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 MYBL2P10244 700 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 LSP1P33241 339 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 CCNHP51946 323 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 EPHB4P54760 987 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 RPS8P62241 208 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 OS9Q13438 667 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 PTGISQ16647 500 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 GLE1Q53GS7 698 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 METTL16Q86W50 562 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 MREGQ8N565 214 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 OR8K1Q8NGG5 319 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 ZNF473Q8WTR7 871 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 FBXW7Q969H0 707 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 FSD1Q9BTV5 496 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 DSCC1Q9BVC3 393 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 NUCKS1Q9H1E3 243 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 GREM2Q9H772 168 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 ADD3Q9UEY8 706 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 POLLQ9UGP5 575 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 GJA3Q9Y6H8 435 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 ZMYM6O95789 1325 aa11.85□□□□□ -0.51
NIF3L1-204ENST00000409357 CYP21A2P08686 494 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 PLCD1P51178 756 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 AKAP17AQ02040 695 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 RBL2Q08999 1139 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 SEMA3FQ13275 785 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 CCDC152Q4G0S7 254 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 ZC3H12AQ5D1E8 599 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 FAM228AQ86W67 206 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 GPC2Q8N158 579 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 ARFGAP2Q8N6H7 521 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 TTLL11Q8NHH1 800 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 C8orf76Q96K31 380 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 PLCD4Q9BRC7 762 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 SIL1Q9H173 461 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 CORO1CQ9ULV4 474 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 PCDHA5Q9Y5H7 936 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 UTYO14607 1347 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 A0A1B0GUL6 1792 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 WDR19Q8NEZ3 1342 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 ERICH2A1L162 156 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 C5orf60A6NFR6 353 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 YDJCA8MPS7 323 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 AHCYL1O43865 530 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 HSF2BPO75031 334 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 FESP07332 822 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 BMP6P22004 513 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 SCNN1DP51172 638 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 FSTL1Q12841 308 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 PTPAQ15257 358 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 KIAA0753Q2KHM9 967 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 CDKAL1Q5VV42 579 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 SPATA1Q5VX52 437 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 SHC4Q6S5L8 630 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 AACSQ86V21 672 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 FOXP4Q8IVH2 680 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 NIM1KQ8IY84 436 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 SMC1BQ8NDV3 1235 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 OSBPL9Q96SU4 736 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 TAF1DQ9H5J8 278 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 TPX2Q9ULW0 747 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
NIF3L1-204ENST00000409357 MROH7-TTC4A0A0A0MT08 1334 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 KIF23Q02241 960 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 PDE4BQ07343 736 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 CCDC121Q6ZUS5 278 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 TMC4Q7Z404 712 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms