RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 FZD1Q9UP38 647 aa9.49□□□□□ -0.89
SH3D19-202ENST00000409252 ELP1O95163 1332 aa9.49□□□□□ -0.89
SH3D19-202ENST00000409252 SPDYE4A6NLX3 237 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 MMP1P03956 469 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 MTIF2P46199 727 aaKnown RBP9.48□□□□□ -0.89
SH3D19-202ENST00000409252 ACER1Q8TDN7 264 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 ZC3H15Q8WU90 426 aaKnown RBP9.48□□□□□ -0.89
SH3D19-202ENST00000409252 AIFM3Q96NN9 605 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 CA8P35219 290 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 SMTNP53814 917 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 AP3B2Q13367 1082 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 PFKFB3Q16875 520 aaPredicted RBP9.48□□□□□ -0.89
SH3D19-202ENST00000409252 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 PPP1R18Q6NYC8 613 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 CCDC102AQ96A19 550 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 FOXP1Q9H334 677 aaPredicted RBP9.48□□□□□ -0.89
SH3D19-202ENST00000409252 SEPT11Q9NVA2 429 aaKnown RBP9.48□□□□□ -0.89
SH3D19-202ENST00000409252 KDM3AQ9Y4C1 1321 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 ITGB4P16144 1822 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 SHTN1A0MZ66 631 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 CETN1Q12798 172 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 HS2ST1Q7LGA3 356 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 METTL13Q8N6R0 699 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 ARFGEF2Q9Y6D5 1785 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 GCFC2P16383 781 aaKnown RBP9.48□□□□□ -0.89
SH3D19-202ENST00000409252 BACE1P56817 501 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 MFSD14CQ5VZR4 134 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 APBB1IPQ7Z5R6 666 aaPredicted RBP9.48□□□□□ -0.89
SH3D19-202ENST00000409252 ZFPM1Q8IX07 1006 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 MB21D1Q8N884 522 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 MMRN2Q9H8L6 949 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 SH3GLB2Q9NR46 395 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 FAM198AQ9UFP1 575 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 KCNH3Q9ULD8 1083 aa9.48□□□□□ -0.89
SH3D19-202ENST00000409252 PSMA7O14818 248 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
SH3D19-202ENST00000409252 CDC27P30260 824 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 IGBP1P78318 339 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 NR5A1Q13285 461 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 ODF2Q5BJF6 829 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 ZFYVE27Q5T4F4 411 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 FAM114A1Q8IWE2 563 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 NSUN6Q8TEA1 469 aaKnown RBP9.47□□□□□ -0.89
SH3D19-202ENST00000409252 NT5C3AQ9H0P0 336 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 MKRN1Q9UHC7 482 aaKnown RBP9.47□□□□□ -0.89
SH3D19-202ENST00000409252 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
SH3D19-202ENST00000409252 PDHBP11177 359 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 HARSP12081 509 aaKnown RBP9.47□□□□□ -0.89
SH3D19-202ENST00000409252 STXBP2Q15833 593 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 USP17L6PQ6QN14 398 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 USP37Q86T82 979 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 GPRC5AQ8NFJ5 357 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 ATG4CQ96DT6 458 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 MTMR6Q9Y217 621 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.47□□□□□ -0.89
SH3D19-202ENST00000409252 YEATS4O95619 227 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 SLC51AQ86UW1 340 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 LEO1Q8WVC0 666 aaPredicted RBP9.47□□□□□ -0.89
SH3D19-202ENST00000409252 FAM212AQ96EL1 285 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 DEF6Q9H4E7 631 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 NMRK2Q9NPI5 230 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 PRR12Q9ULL5 1215 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 PCDHA6Q9UN73 950 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 PCDHA8Q9Y5H6 950 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 STK36Q9NRP7 1315 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 KRT13P13646 458 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 TRAPPC10P48553 1259 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 RHBDL3P58872 404 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 XKR9Q5GH70 373 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 MAP7D2Q96T17 732 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 NBPF3Q9H094 633 aa9.47□□□□□ -0.89
SH3D19-202ENST00000409252 THSD7AQ9UPZ6 1657 aa9.46□□□□□ -0.89
SH3D19-202ENST00000409252 LTBP3Q9NS15 1303 aa9.46□□□□□ -0.89
SH3D19-202ENST00000409252 POLR2DO15514 142 aaKnown RBP9.46□□□□□ -0.89
SH3D19-202ENST00000409252 SHMT1P34896 483 aa9.46□□□□□ -0.89
SH3D19-202ENST00000409252 STRN3Q13033 797 aa9.46□□□□□ -0.89
SH3D19-202ENST00000409252 MIS18BP1Q6P0N0 1132 aa9.46□□□□□ -0.89
SH3D19-202ENST00000409252 MANSC4A6NHS7 340 aaPredicted RBP9.46□□□□□ -0.9
SH3D19-202ENST00000409252 MRE11P49959 708 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 CYP4A11Q02928 519 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 RAD51AP2Q09MP3 1159 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 PTGDRQ13258 359 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 GLIPR1L2Q4G1C9 344 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 SPZ1Q9BXG8 430 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 WDR11Q9BZH6 1224 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 NRBP2Q9NSY0 501 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 YBX3P16989 372 aaKnown RBP eCLIP9.46□□□□□ -0.9
SH3D19-202ENST00000409252 ANTXR2P58335 489 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 EXOSC10Q01780 885 aaKnown RBP9.46□□□□□ -0.9
SH3D19-202ENST00000409252 KIF23Q02241 960 aaPredicted RBP9.46□□□□□ -0.9
SH3D19-202ENST00000409252 FAM160A1Q05DH4 1040 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 HSP90AA2PQ14568 343 aaPredicted RBP9.46□□□□□ -0.9
SH3D19-202ENST00000409252 TKFCQ3LXA3 575 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 IGDCC4Q8TDY8 1250 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 ATP6V0A1Q93050 837 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 ZFP91Q96JP5 570 aaPredicted RBP9.46□□□□□ -0.9
SH3D19-202ENST00000409252 USP28Q96RU2 1077 aa9.46□□□□□ -0.9
SH3D19-202ENST00000409252 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.46□□□□□ -0.9
SH3D19-202ENST00000409252 TRAF5O00463 557 aa9.45□□□□□ -0.9
SH3D19-202ENST00000409252 PHACTR2O75167 634 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms