RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ERVK-24P63145 666 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 GRAPQ13588 217 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 RTN1Q16799 776 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 USP17L1Q7RTZ2 530 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 GRAPLQ8TC17 118 aaPredicted RBP14.46□□□□□ -0.09
PTPRN-202ENST00000409251 CCDC114Q96M63 670 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 TUBE1Q9UJT0 475 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 HPCAL4Q9UM19 191 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 TTF2Q9UNY4 1162 aaKnown RBP14.46□□□□□ -0.09
PTPRN-202ENST00000409251 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.46□□□□□ -0.09
PTPRN-202ENST00000409251 GOLGA6L7A0A1B0GV03 622 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 CDKL5O76039 1030 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 SYF2O95926 243 aaKnown RBP14.46□□□□□ -0.09
PTPRN-202ENST00000409251 GYPCP04921 128 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 IFIT1BQ5T764 474 aaKnown RBP14.46□□□□□ -0.09
PTPRN-202ENST00000409251 RC3H1Q5TC82 1133 aaKnown RBP14.46□□□□□ -0.09
PTPRN-202ENST00000409251 POLLQ9UGP5 575 aa14.46□□□□□ -0.09
PTPRN-202ENST00000409251 V9GY48 417 aaPredicted RBP14.46□□□□□ -0.09
PTPRN-202ENST00000409251 PLEKHA8P1O95397 391 aa14.46□□□□□ -0.1
PTPRN-202ENST00000409251 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.1
PTPRN-202ENST00000409251 EPN1Q9Y6I3 576 aaPredicted RBP14.46□□□□□ -0.1
PTPRN-202ENST00000409251 PCNTO95613 3336 aa14.46□□□□□ -0.1
PTPRN-202ENST00000409251 TRIM49BA6NDI0 452 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 E7EVH7 732 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 MYO1BO43795 1136 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 RPAINQ86UA6 219 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 GGA1Q9UJY5 639 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 COL1A1P02452 1464 aaPredicted RBP14.45□□□□□ -0.1
PTPRN-202ENST00000409251 FAM196BA6NMK8 535 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 VEGFAP15692 232 aaPredicted RBP14.45□□□□□ -0.1
PTPRN-202ENST00000409251 ARID5AQ03989 594 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 TCP10Q12799 353 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 WHAMMP3Q1A5X7 153 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 KRT26Q7Z3Y9 468 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 DEFB132Q7Z7B7 95 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 ANKRD2Q9GZV1 360 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 CEP83Q9Y592 693 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 PPP1R12BO60237 982 aaPredicted RBP14.45□□□□□ -0.1
PTPRN-202ENST00000409251 RESP18Q5W5W9 173 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 ARL8AQ96BM9 186 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 RIOK1Q9BRS2 568 aaKnown RBP14.45□□□□□ -0.1
PTPRN-202ENST00000409251 KCND1Q9NSA2 647 aa14.45□□□□□ -0.1
PTPRN-202ENST00000409251 ZNHIT6Q9NWK9 470 aaKnown RBP14.45□□□□□ -0.1
PTPRN-202ENST00000409251 LUC7L2Q9Y383 392 aaKnown RBP14.45□□□□□ -0.1
PTPRN-202ENST00000409251 HSF2BPO75031 334 aa14.44□□□□□ -0.1
PTPRN-202ENST00000409251 CYP26C1Q6V0L0 522 aa14.44□□□□□ -0.1
PTPRN-202ENST00000409251 FBXO33Q7Z6M2 555 aa14.44□□□□□ -0.1
PTPRN-202ENST00000409251 ZNF654Q8IZM8 581 aa14.44□□□□□ -0.1
PTPRN-202ENST00000409251 COG1Q8WTW3 980 aa14.44□□□□□ -0.1
PTPRN-202ENST00000409251 ESR2Q92731 530 aa14.44□□□□□ -0.1
PTPRN-202ENST00000409251 CRNKL1Q9BZJ0 848 aaKnown RBP14.44□□□□□ -0.1
PTPRN-202ENST00000409251 PCDHAC2Q9Y5I4 1007 aa14.44□□□□□ -0.1
PTPRN-202ENST00000409251 NOSTRINQ8IVI9 506 aa14.44□□□□□ -0.1
PTPRN-202ENST00000409251 KSR1Q8IVT5 923 aa14.44□□□□□ -0.1
PTPRN-202ENST00000409251 CTCFLQ8NI51 663 aaPredicted RBP14.44□□□□□ -0.1
PTPRN-202ENST00000409251 DCP1AQ9NPI6 582 aaPredicted RBP14.44□□□□□ -0.1
PTPRN-202ENST00000409251 PLCD1P51178 756 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 KRT31Q15323 416 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 PRPF38AQ8NAV1 312 aaKnown RBP14.43□□□□□ -0.1
PTPRN-202ENST00000409251 TRIM47Q96LD4 638 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPRN-202ENST00000409251 PAPPAQ13219 1627 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 SMIM23A6NLE4 172 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 GBP2P32456 591 aaPredicted RBP14.43□□□□□ -0.1
PTPRN-202ENST00000409251 TFAP4Q01664 338 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 NR1I3Q14994 352 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 KIAA0825Q8IV33 1275 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 ENOX1Q8TC92 643 aaKnown RBP14.43□□□□□ -0.1
PTPRN-202ENST00000409251 KRT23Q9C075 422 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 BUB1O43683 1085 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 CDC25CP30307 473 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 MCM7P33993 719 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 IQCA1Q86XH1 822 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 TMTC1Q8IUR5 882 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 DMGDHQ9UI17 866 aaKnown RBP14.43□□□□□ -0.1
PTPRN-202ENST00000409251 GDAQ9Y2T3 454 aa14.43□□□□□ -0.1
PTPRN-202ENST00000409251 NCK2O43639 380 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 CLNS1AP54105 237 aaKnown RBP14.42□□□□□ -0.1
PTPRN-202ENST00000409251 SLC10A5Q5PT55 438 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 ENAHQ8N8S7 591 aaPredicted RBP14.42□□□□□ -0.1
PTPRN-202ENST00000409251 MED15Q96RN5 788 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 LRRC1Q9BTT6 524 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 ZC3H12CQ9C0D7 883 aaKnown RBP14.42□□□□□ -0.1
PTPRN-202ENST00000409251 YY1AP1Q9H869 796 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 CD209Q9NNX6 404 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 ABHD10Q9NUJ1 306 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 RFX7Q2KHR2 1363 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 NDUFA10O95299 355 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 BTDP43251 543 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 ZNF804AQ7Z570 1209 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 SYMPKQ92797 1274 aaKnown RBP14.42□□□□□ -0.1
PTPRN-202ENST00000409251 ZNF512BQ96KM6 892 aaPredicted RBP14.42□□□□□ -0.1
PTPRN-202ENST00000409251 ALDH8A1Q9H2A2 487 aaPredicted RBP14.42□□□□□ -0.1
PTPRN-202ENST00000409251 MAGEC2Q9UBF1 373 aaPredicted RBP14.42□□□□□ -0.1
PTPRN-202ENST00000409251 USP14P54578 494 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 SPATA1Q5VX52 437 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 CABS1Q96KC9 395 aa14.42□□□□□ -0.1
PTPRN-202ENST00000409251 FAM217BQ9NTX9 383 aaPredicted RBP14.42□□□□□ -0.1
PTPRN-202ENST00000409251 SPEF2Q9C093 1822 aa14.41□□□□□ -0.1
PTPRN-202ENST00000409251 ZSCAN5CA6NGD5 496 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms