RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 HDAC4P56524 1084 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 RCN2Q14257 317 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-203ENST00000409161 TRAIPQ9BWF2 469 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 B4E1Z4 1266 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 PGRMC1O00264 195 aaKnown RBP13.21□□□□□ -0.29
SHANK2-203ENST00000409161 GPAA1O43292 621 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 TNNC2P02585 160 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 MAP3K10Q02779 954 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 RNF207Q6ZRF8 634 aa13.21□□□□□ -0.29
SHANK2-203ENST00000409161 FANCAO15360 1455 aa13.21□□□□□ -0.3
SHANK2-203ENST00000409161 MCF2LO15068 1137 aa13.21□□□□□ -0.3
SHANK2-203ENST00000409161 NR1I2O75469 434 aa13.21□□□□□ -0.3
SHANK2-203ENST00000409161 KRT39Q6A163 491 aa13.21□□□□□ -0.3
SHANK2-203ENST00000409161 POLE3Q9NRF9 147 aa13.21□□□□□ -0.3
SHANK2-203ENST00000409161 MROH5Q6ZUA9 1318 aa13.21□□□□□ -0.3
SHANK2-203ENST00000409161 GAS7O60861 476 aa13.21□□□□□ -0.3
SHANK2-203ENST00000409161 POLKQ9UBT6 870 aa13.21□□□□□ -0.3
SHANK2-203ENST00000409161 ARHGAP10A1A4S6 786 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 IRS4O14654 1257 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-203ENST00000409161 RXRAP19793 462 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 MAGEA9P43362 315 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 IQCB1Q15051 598 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
SHANK2-203ENST00000409161 PCDH11XQ9BZA7 1347 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 PCDH11YQ9BZA8 1340 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 KRT4P19013 534 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 RAPH1Q70E73 1250 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 PIP4K2CQ8TBX8 421 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 NOSTRINQ8IVI9 506 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 BBS5Q8N3I7 341 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 TRIM33Q9UPN9 1127 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 EFCAB14O75071 495 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 SERPINB2P05120 415 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 GUCY2CP25092 1073 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 PDE1BQ01064 536 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 PNOCQ13519 176 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 CDC37L1Q7L3B6 337 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 SPATA1Q5VX52 437 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 KRT19P08727 400 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 MMS22LQ6ZRQ5 1243 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 LRRC37BQ96QE4 947 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-203ENST00000409161 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-203ENST00000409161 MSH2P43246 934 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 YARSP54577 528 aaKnown RBP13.2□□□□□ -0.3
SHANK2-203ENST00000409161 GPCPD1Q9NPB8 672 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 GIMAP4Q9NUV9 329 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 RGS12O14924 1447 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 F8W031 263 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-203ENST00000409161 CPP00450 1065 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 PARP10Q53GL7 1025 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 PPP1R13BQ96KQ4 1090 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 FMO2Q99518 471 aa13.2□□□□□ -0.3
SHANK2-203ENST00000409161 IQSEC3Q9UPP2 1182 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-203ENST00000409161 SPAG7O75391 227 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 ABCB4P21439 1286 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 EMBQ6PCB8 327 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 DNMT1P26358 1616 aaKnown RBP13.19□□□□□ -0.3
SHANK2-203ENST00000409161 NPATQ14207 1427 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 IFNA8P32881 189 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 KBTBD3Q8NAB2 608 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 SAAL1Q96ER3 474 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 NDE1Q9NXR1 346 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 ACEP12821 1306 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 KRT8P05787 483 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 RPSAP08865 295 aaKnown RBP13.19□□□□□ -0.3
SHANK2-203ENST00000409161 CMA1P23946 247 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 ZBTB9Q96C00 473 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 TMEM247A6NEH6 219 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 ZNF233A6NK53 670 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 LONP1P36776 959 aaKnown RBP13.19□□□□□ -0.3
SHANK2-203ENST00000409161 TNNI3KQ59H18 835 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 LCA5Q86VQ0 697 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
SHANK2-203ENST00000409161 ZBTB8OSQ8IWT0 167 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 HESX1Q9UBX0 185 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 FPGT-TNNI3KV9GXZ4 949 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 YTHDC2Q9H6S0 1430 aaKnown RBP13.19□□□□□ -0.3
SHANK2-203ENST00000409161 CHEK2O96017 543 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 SP4Q02446 784 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 PALMDQ9NP74 551 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 ZNF148Q9UQR1 794 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 YWHAGP61981 247 aaKnown RBP eCLIP13.19□□□□□ -0.3
SHANK2-203ENST00000409161 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
SHANK2-203ENST00000409161 SGK1O00141 431 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 PPP1R12AO14974 1030 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-203ENST00000409161 BRD2P25440 801 aaKnown RBP13.18□□□□□ -0.3
SHANK2-203ENST00000409161 KRT28Q7Z3Y7 464 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 FAM186BQ8IYM0 893 aa13.18□□□□□ -0.3
SHANK2-203ENST00000409161 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-203ENST00000409161 SLC13A4Q9UKG4 626 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms