RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 MAP3K11Q16584 847 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 NBPF12Q5TAG4 269 aaPredicted RBP11.17□□□□□ -0.62
POLR1A-202ENST00000409024 RESP18Q5W5W9 173 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 PIK3AP1Q6ZUJ8 805 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 FMR1NBQ8N0W7 255 aaPredicted RBP11.17□□□□□ -0.62
POLR1A-202ENST00000409024 REXO1Q8N1G1 1221 aaKnown RBP11.17□□□□□ -0.62
POLR1A-202ENST00000409024 SAMD3Q8N6K7 520 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 PIBF1Q8WXW3 757 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 CUL5Q93034 780 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 CCDC34Q96HJ3 373 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 MAF1Q9H063 256 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 FAM13BQ9NYF5 915 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 USP25Q9UHP3 1055 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 PCDHB6Q9Y5E3 794 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 NR1I2O75469 434 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 FOSP01100 380 aaPredicted RBP11.16□□□□□ -0.62
POLR1A-202ENST00000409024 PRPHP41219 470 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 CLK2P49760 499 aaKnown RBP11.16□□□□□ -0.62
POLR1A-202ENST00000409024 AP3B2Q13367 1082 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 SNW1Q13573 536 aaKnown RBP11.16□□□□□ -0.62
POLR1A-202ENST00000409024 PKN2Q16513 984 aaKnown RBP11.16□□□□□ -0.62
POLR1A-202ENST00000409024 CDC37Q16543 378 aaPredicted RBP11.16□□□□□ -0.62
POLR1A-202ENST00000409024 SHROOM1Q2M3G4 852 aaPredicted RBP11.16□□□□□ -0.62
POLR1A-202ENST00000409024 QRICH1Q2TAL8 776 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 FBXO11Q86XK2 927 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 SULF1Q8IWU6 871 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 CDAN1Q8IWY9 1227 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 ACER1Q8TDN7 264 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 CCDC102AQ96A19 550 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 C12orf42Q96LP6 360 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 TNMDQ9H2S6 317 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 TSPY26PQ9H489 355 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 PICK1Q9NRD5 415 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 RNF186Q9NXI6 227 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 HOOK1Q9UJC3 728 aaKnown RBP11.16□□□□□ -0.62
POLR1A-202ENST00000409024 FBXO2Q9UK22 296 aaPredicted RBP11.16□□□□□ -0.62
POLR1A-202ENST00000409024 HPSEQ9Y251 543 aa11.16□□□□□ -0.62
POLR1A-202ENST00000409024 ASTN2O75129 1339 aaPredicted RBP11.15□□□□□ -0.62
POLR1A-202ENST00000409024 SYCE3A1L190 88 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 CCDC192P0DO97 292 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 GCFC2P16383 781 aaKnown RBP11.15□□□□□ -0.62
POLR1A-202ENST00000409024 MARCKSP29966 332 aaPredicted RBP11.15□□□□□ -0.62
POLR1A-202ENST00000409024 NF2P35240 595 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 SLC16A2P36021 539 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 LONP1P36776 959 aaKnown RBP11.15□□□□□ -0.62
POLR1A-202ENST00000409024 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
POLR1A-202ENST00000409024 EARS2Q5JPH6 523 aaKnown RBP11.15□□□□□ -0.62
POLR1A-202ENST00000409024 RGMBQ6NW40 437 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 KANK3Q6NY19 840 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 MOXD1Q6UVY6 613 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 RASGRP2Q7LDG7 609 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 NEK8Q86SG6 692 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 PRPF38AQ8NAV1 312 aaKnown RBP11.15□□□□□ -0.62
POLR1A-202ENST00000409024 COA7Q96BR5 231 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 FEZ1Q99689 392 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 RANBP17Q9H2T7 1088 aaKnown RBP11.15□□□□□ -0.62
POLR1A-202ENST00000409024 CPVLQ9H3G5 476 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 PSTPIP2Q9H939 334 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 MAP3K20Q9NYL2 800 aaKnown RBP11.15□□□□□ -0.62
POLR1A-202ENST00000409024 PRR12Q9ULL5 1215 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 PCDHA1Q9Y5I3 950 aa11.15□□□□□ -0.62
POLR1A-202ENST00000409024 PIK3CDO00329 1044 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 RAD21O60216 631 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 PPP1R12BO60237 982 aaPredicted RBP11.14□□□□□ -0.63
POLR1A-202ENST00000409024 PPP1R11O60927 126 aaPredicted RBP11.14□□□□□ -0.63
POLR1A-202ENST00000409024 ZNF202O95125 648 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 PTPRAP18433 802 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 DEKP35659 375 aaKnown RBP11.14□□□□□ -0.63
POLR1A-202ENST00000409024 SYKP43405 635 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 FXR1P51114 621 aaKnown RBP eCLIP11.14□□□□□ -0.63
POLR1A-202ENST00000409024 USP11P51784 963 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 NDUFA8P51970 172 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 BACE1P56817 501 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 PTGDRQ13258 359 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 UVSSAQ2YD98 709 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 FAM83BQ5T0W9 1011 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 PPP4R3AQ6IN85 833 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 SHC4Q6S5L8 630 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 C4orf32Q8N8J7 132 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 ZNF280CQ8ND82 737 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 AK8Q96MA6 479 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 WRNIP1Q96S55 665 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 FUCA2Q9BTY2 467 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 GOLPH3LQ9H4A5 285 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 GRPEL1Q9HAV7 217 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 KCNH3Q9ULD8 1083 aa11.14□□□□□ -0.63
POLR1A-202ENST00000409024 MRPL11Q9Y3B7 192 aaKnown RBP11.14□□□□□ -0.63
POLR1A-202ENST00000409024 ABCB11O95342 1321 aa11.13□□□□□ -0.63
POLR1A-202ENST00000409024 DOCK1Q14185 1865 aa11.13□□□□□ -0.63
POLR1A-202ENST00000409024 A0A1B0GVL5 298 aa11.13□□□□□ -0.63
POLR1A-202ENST00000409024 FAM155AB1AL88 458 aaPredicted RBP11.13□□□□□ -0.63
POLR1A-202ENST00000409024 PFKFB1P16118 471 aa11.13□□□□□ -0.63
POLR1A-202ENST00000409024 INPP5BP32019 993 aa11.13□□□□□ -0.63
POLR1A-202ENST00000409024 ZNF174Q15697 407 aa11.13□□□□□ -0.63
POLR1A-202ENST00000409024 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
POLR1A-202ENST00000409024 SASS6Q6UVJ0 657 aa11.13□□□□□ -0.63
POLR1A-202ENST00000409024 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms