RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.47■■□□□ 1.83
KDELR3-202ENST00000409006 HIP1O00291 1037 aa26.47■■□□□ 1.83
KDELR3-202ENST00000409006 SNHG28P0DPA3 235 aa26.47■■□□□ 1.83
KDELR3-202ENST00000409006 ZNF543Q08ER8 600 aa26.47■■□□□ 1.83
KDELR3-202ENST00000409006 KCNA10Q16322 511 aa26.47■■□□□ 1.83
KDELR3-202ENST00000409006 ESR2Q92731 530 aa26.47■■□□□ 1.83
KDELR3-202ENST00000409006 TSEN34Q9BSV6 310 aaKnown RBP26.47■■□□□ 1.83
KDELR3-202ENST00000409006 MYH6P13533 1939 aa26.46■■□□□ 1.83
KDELR3-202ENST00000409006 KDM4AO75164 1064 aa26.46■■□□□ 1.83
KDELR3-202ENST00000409006 NSMFQ6X4W1 530 aa26.46■■□□□ 1.83
KDELR3-202ENST00000409006 DSCC1Q9BVC3 393 aa26.46■■□□□ 1.83
KDELR3-202ENST00000409006 B4E1Z4 1266 aa26.45■■□□□ 1.82
KDELR3-202ENST00000409006 CTAGE5O15320 804 aa26.45■■□□□ 1.82
KDELR3-202ENST00000409006 C6orf222P0C671 652 aaPredicted RBP26.45■■□□□ 1.82
KDELR3-202ENST00000409006 PTGS1P23219 599 aa26.45■■□□□ 1.82
KDELR3-202ENST00000409006 ITGB8P26012 769 aa26.45■■□□□ 1.82
KDELR3-202ENST00000409006 TTC22Q5TAA0 569 aa26.45■■□□□ 1.82
KDELR3-202ENST00000409006 BADQ92934 168 aa26.45■■□□□ 1.82
KDELR3-202ENST00000409006 UPF3AQ9H1J1 476 aaKnown RBP26.45■■□□□ 1.82
KDELR3-202ENST00000409006 NFIBO00712 420 aa26.44■■□□□ 1.82
KDELR3-202ENST00000409006 GOLGA8HP0CJ92 632 aa26.44■■□□□ 1.82
KDELR3-202ENST00000409006 CST5P28325 142 aaPredicted RBP26.44■■□□□ 1.82
KDELR3-202ENST00000409006 GJA9P57773 515 aa26.44■■□□□ 1.82
KDELR3-202ENST00000409006 CPVLQ9H3G5 476 aa26.44■■□□□ 1.82
KDELR3-202ENST00000409006 STARD7Q9NQZ5 370 aa26.44■■□□□ 1.82
KDELR3-202ENST00000409006 ASB14A6NK59 587 aa26.43■■□□□ 1.82
KDELR3-202ENST00000409006 PQBP1O60828 265 aaKnown RBP26.43■■□□□ 1.82
KDELR3-202ENST00000409006 BAATQ14032 418 aaPredicted RBP26.43■■□□□ 1.82
KDELR3-202ENST00000409006 TMEM63BQ5T3F8 832 aa26.43■■□□□ 1.82
KDELR3-202ENST00000409006 DGKHQ86XP1 1220 aa26.43■■□□□ 1.82
KDELR3-202ENST00000409006 PDGFCQ9NRA1 345 aa26.43■■□□□ 1.82
KDELR3-202ENST00000409006 ZSWIM5Q9P217 1185 aa26.43■■□□□ 1.82
KDELR3-202ENST00000409006 MOXD2PA6NHM9 499 aa26.42■■□□□ 1.82
KDELR3-202ENST00000409006 ASGR1P07306 291 aa26.42■■□□□ 1.82
KDELR3-202ENST00000409006 Q7L0L9 218 aa26.42■■□□□ 1.82
KDELR3-202ENST00000409006 EEPD1Q7L9B9 569 aa26.42■■□□□ 1.82
KDELR3-202ENST00000409006 CLEC4DQ8WXI8 215 aa26.42■■□□□ 1.82
KDELR3-202ENST00000409006 CLTBP09497 229 aa26.41■■□□□ 1.82
KDELR3-202ENST00000409006 BEX3Q00994 111 aa26.41■■□□□ 1.82
KDELR3-202ENST00000409006 TNFAIP2Q03169 654 aa26.41■■□□□ 1.82
KDELR3-202ENST00000409006 IMMTQ16891 758 aaKnown RBP26.41■■□□□ 1.82
KDELR3-202ENST00000409006 TAPT1Q6NXT6 567 aa26.41■■□□□ 1.82
KDELR3-202ENST00000409006 FBXO16Q8IX29 292 aaPredicted RBP26.41■■□□□ 1.82
KDELR3-202ENST00000409006 NUP133Q8WUM0 1156 aa26.41■■□□□ 1.82
KDELR3-202ENST00000409006 UBA5Q9GZZ9 404 aa26.41■■□□□ 1.82
KDELR3-202ENST00000409006 GNEQ9Y223 722 aaKnown RBP26.41■■□□□ 1.82
KDELR3-202ENST00000409006 FAAP100Q0VG06 881 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 SHHQ15465 462 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 GNASQ5JWF2 1037 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 C9orf50Q5SZB4 431 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 GPR153Q6NV75 609 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 SLC30A10Q6XR72 485 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 ANKRD33Q7Z3H0 272 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 IQCA1Q86XH1 822 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 ENAHQ8N8S7 591 aaPredicted RBP26.4■■□□□ 1.82
KDELR3-202ENST00000409006 PNMA1Q8ND90 353 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 ANKS1AQ92625 1134 aa26.4■■□□□ 1.82
KDELR3-202ENST00000409006 ZSCAN10Q96SZ4 725 aaPredicted RBP26.4■■□□□ 1.82
KDELR3-202ENST00000409006 SMPD1P17405 629 aa26.39■■□□□ 1.82
KDELR3-202ENST00000409006 NKX3-2P78367 333 aa26.39■■□□□ 1.82
KDELR3-202ENST00000409006 PCSK9Q8NBP7 692 aaKnown RBP26.39■■□□□ 1.82
KDELR3-202ENST00000409006 MORC4Q8TE76 937 aa26.39■■□□□ 1.82
KDELR3-202ENST00000409006 SPC25Q9HBM1 224 aa26.39■■□□□ 1.82
KDELR3-202ENST00000409006 CTNNA3Q9UI47 895 aa26.39■■□□□ 1.82
KDELR3-202ENST00000409006 PTPDC1A2A3K4 754 aa26.38■■□□□ 1.81
KDELR3-202ENST00000409006 KIAA0355O15063 1070 aa26.38■■□□□ 1.81
KDELR3-202ENST00000409006 NOL8Q76FK4 1167 aaKnown RBP26.38■■□□□ 1.81
KDELR3-202ENST00000409006 DEFB123Q8N688 67 aa26.38■■□□□ 1.81
KDELR3-202ENST00000409006 GLT1D1Q96MS3 346 aa26.38■■□□□ 1.81
KDELR3-202ENST00000409006 TOX2Q96NM4 488 aa26.38■■□□□ 1.81
KDELR3-202ENST00000409006 ELP1O95163 1332 aa26.38■■□□□ 1.81
KDELR3-202ENST00000409006 CDK7P50613 346 aa26.37■■□□□ 1.81
KDELR3-202ENST00000409006 ALDH5A1P51649 535 aaPredicted RBP26.37■■□□□ 1.81
KDELR3-202ENST00000409006 GPATCH4Q5T3I0 446 aaKnown RBP26.37■■□□□ 1.81
KDELR3-202ENST00000409006 KAT14Q9H8E8 782 aa26.37■■□□□ 1.81
KDELR3-202ENST00000409006 TMEM39AQ9NV64 488 aa26.37■■□□□ 1.81
KDELR3-202ENST00000409006 TNKSO95271 1327 aa26.37■■□□□ 1.81
KDELR3-202ENST00000409006 WDR19Q8NEZ3 1342 aa26.37■■□□□ 1.81
KDELR3-202ENST00000409006 CHMLP26374 656 aa26.36■■□□□ 1.81
KDELR3-202ENST00000409006 CALML3P27482 149 aa26.36■■□□□ 1.81
KDELR3-202ENST00000409006 NT5C2P49902 561 aa26.36■■□□□ 1.81
KDELR3-202ENST00000409006 EPHB4P54760 987 aa26.36■■□□□ 1.81
KDELR3-202ENST00000409006 PTH1RQ03431 593 aa26.36■■□□□ 1.81
KDELR3-202ENST00000409006 CCDC178Q5BJE1 867 aa26.36■■□□□ 1.81
KDELR3-202ENST00000409006 TLK2Q86UE8 772 aa26.36■■□□□ 1.81
KDELR3-202ENST00000409006 VTI1AQ96AJ9 217 aa26.36■■□□□ 1.81
KDELR3-202ENST00000409006 KRT23Q9C075 422 aa26.36■■□□□ 1.81
KDELR3-202ENST00000409006 DCDC2CA8MYV0 355 aa26.35■■□□□ 1.81
KDELR3-202ENST00000409006 DYNC1LI2O43237 492 aaPredicted RBP26.35■■□□□ 1.81
KDELR3-202ENST00000409006 RPS6P62753 249 aaKnown RBP26.35■■□□□ 1.81
KDELR3-202ENST00000409006 USH1GQ495M9 461 aa26.35■■□□□ 1.81
KDELR3-202ENST00000409006 IQSEC1Q6DN90 963 aa26.35■■□□□ 1.81
KDELR3-202ENST00000409006 RNF207Q6ZRF8 634 aa26.35■■□□□ 1.81
KDELR3-202ENST00000409006 VTA1Q9NP79 307 aa26.35■■□□□ 1.81
KDELR3-202ENST00000409006 ADD3Q9UEY8 706 aaKnown RBP26.35■■□□□ 1.81
KDELR3-202ENST00000409006 RAG1P15918 1043 aa26.34■■□□□ 1.81
KDELR3-202ENST00000409006 CXCL17Q6UXB2 119 aa26.34■■□□□ 1.81
KDELR3-202ENST00000409006 KIAA1211Q6ZU35 1233 aa26.34■■□□□ 1.81
KDELR3-202ENST00000409006 CYB5R4Q7L1T6 521 aa26.34■■□□□ 1.81
KDELR3-202ENST00000409006 RAD50Q92878 1312 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms