RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 FAM169AQ9Y6X4 670 aa17.35■□□□□ 0.37
SSFA2-202ENST00000409001 LRRC7Q96NW7 1537 aa17.35■□□□□ 0.37
SSFA2-202ENST00000409001 USP27XA6NNY8 438 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 GAS8O95995 478 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 ZNF354CQ86Y25 554 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 CUEDC2Q9H467 287 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 PRPF3O43395 683 aaKnown RBP17.34■□□□□ 0.37
SSFA2-202ENST00000409001 NDUFA10O95299 355 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 EXOC3L4Q17RC7 722 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 TBCKQ8TEA7 893 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 ECM2O94769 699 aaPredicted RBP17.34■□□□□ 0.37
SSFA2-202ENST00000409001 CD19P15391 556 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 PTPREP23469 700 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 ATP11AP98196 1134 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 KIAA0825Q8IV33 1275 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 MAGEF1Q9HAY2 307 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 RWDD2AQ9UIY3 292 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 WDR17Q8IZU2 1322 aa17.34■□□□□ 0.37
SSFA2-202ENST00000409001 CACNB1Q02641 598 aaPredicted RBP17.33■□□□□ 0.37
SSFA2-202ENST00000409001 RESP18Q5W5W9 173 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 SMCR8Q8TEV9 937 aaPredicted RBP17.33■□□□□ 0.37
SSFA2-202ENST00000409001 A0A1B0GUA9 196 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 CCDC160A6NGH7 325 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 RNF40O75150 1001 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 PLEKHA8P1O95397 391 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 PABPC4Q13310 644 aaKnown RBP eCLIP17.33■□□□□ 0.371e-8■■■□□ 14.9
SSFA2-202ENST00000409001 PPP1R21Q6ZMI0 780 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 SYNE4Q8N205 404 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 RETREG2Q8NC44 543 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 FAM184BQ9ULE4 1060 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 AXIN2Q9Y2T1 843 aa17.33■□□□□ 0.37
SSFA2-202ENST00000409001 LAD1O00515 517 aa17.33■□□□□ 0.36
SSFA2-202ENST00000409001 KRT31Q15323 416 aa17.33■□□□□ 0.36
SSFA2-202ENST00000409001 PPFIBP2Q8ND30 876 aa17.33■□□□□ 0.36
SSFA2-202ENST00000409001 COL4A3BPQ9Y5P4 624 aa17.33■□□□□ 0.36
SSFA2-202ENST00000409001 USP17L8P0C7I0 530 aa17.33■□□□□ 0.36
SSFA2-202ENST00000409001 TNNI1P19237 187 aa17.33■□□□□ 0.36
SSFA2-202ENST00000409001 NR2F2P24468 414 aa17.33■□□□□ 0.36
SSFA2-202ENST00000409001 AK8Q96MA6 479 aa17.33■□□□□ 0.36
SSFA2-202ENST00000409001 PANX2Q96RD6 677 aa17.33■□□□□ 0.36
SSFA2-202ENST00000409001 METTL14Q9HCE5 456 aaKnown RBP17.33■□□□□ 0.36
SSFA2-202ENST00000409001 KCNQ4P56696 695 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 HHATQ5VTY9 493 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 STMN2Q93045 179 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 PLCB1Q9NQ66 1216 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 CACNA2D3Q8IZS8 1091 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 PIGBQ92521 554 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 BUB1BO60566 1050 aaPredicted RBP17.32■□□□□ 0.36
SSFA2-202ENST00000409001 IFNB1P01574 187 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 ARL1P40616 181 aaPredicted RBP17.32■□□□□ 0.36
SSFA2-202ENST00000409001 FKBP3Q00688 224 aaKnown RBP17.32■□□□□ 0.36
SSFA2-202ENST00000409001 CLUL1Q15846 466 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 DOK7Q18PE1 504 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 FYB2Q5VWT5 728 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 CYB5R4Q7L1T6 521 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 SLFN12Q8IYM2 578 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 DYNLL2Q96FJ2 89 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 GDAQ9Y2T3 454 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 ABCC12Q96J65 1359 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 MAN2A1Q16706 1144 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 CEP128Q6ZU80 1094 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 APBB1IPQ7Z5R6 666 aaPredicted RBP17.32■□□□□ 0.36
SSFA2-202ENST00000409001 FBXO11Q86XK2 927 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 EPB41L5Q9HCM4 733 aa17.32■□□□□ 0.36
SSFA2-202ENST00000409001 ZBED6P86452 979 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 HLFQ16534 295 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 USP17L2Q6R6M4 530 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 MIER3Q7Z3K6 550 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 CCDC127Q96BQ5 260 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 HEXIM1O94992 359 aaKnown RBP17.31■□□□□ 0.36
SSFA2-202ENST00000409001 CCNE1P24864 410 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 ZNF131P52739 623 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 CERKLQ49MI3 558 aaPredicted RBP17.31■□□□□ 0.36
SSFA2-202ENST00000409001 SLFN13Q68D06 897 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 TOGARAM2Q6ZUX3 1019 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 PPM1KQ8N3J5 372 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSFA2-202ENST00000409001 PIGSQ96S52 555 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 FEZ2Q9UHY8 353 aaPredicted RBP17.31■□□□□ 0.36
SSFA2-202ENST00000409001 TBC1D8O95759 1140 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 PCK1P35558 622 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 C2orf54Q08AI8 447 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 ABCB6Q9NP58 842 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 GINS2Q9Y248 185 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 THRAP3Q9Y2W1 955 aaKnown RBP17.31■□□□□ 0.36
SSFA2-202ENST00000409001 DKC1O60832 514 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSFA2-202ENST00000409001 MFAP3LO75121 409 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 PLCG1P19174 1290 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 ATP2B4P23634 1241 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 ICA1Q05084 483 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
SSFA2-202ENST00000409001 LARSQ9P2J5 1176 aaKnown RBP17.31■□□□□ 0.36
SSFA2-202ENST00000409001 SEMA3EO15041 775 aa17.3■□□□□ 0.36
SSFA2-202ENST00000409001 ERFEQ4G0M1 354 aa17.3■□□□□ 0.36
SSFA2-202ENST00000409001 CFAP157Q5JU67 520 aa17.3■□□□□ 0.36
SSFA2-202ENST00000409001 COA7Q96BR5 231 aa17.3■□□□□ 0.36
SSFA2-202ENST00000409001 PARP2Q9UGN5 583 aa17.3■□□□□ 0.36
SSFA2-202ENST00000409001 STX2P32856 288 aa17.3■□□□□ 0.36
SSFA2-202ENST00000409001 EIF4A3P38919 411 aaKnown RBP17.3■□□□□ 0.36
SSFA2-202ENST00000409001 CASP8Q14790 479 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms