RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PGBD1Q96JS3 809 aa24.03■■□□□ 1.44
TPM1-208ENST00000404484 CASP8AP2Q9UKL3 1982 aa24.02■■□□□ 1.44
TPM1-208ENST00000404484 TRIM75PA6NK02 468 aa24.02■■□□□ 1.44
TPM1-208ENST00000404484 USP17L10C9JJH3 530 aa24.02■■□□□ 1.44
TPM1-208ENST00000404484 TRAF1Q13077 416 aa24.02■■□□□ 1.44
TPM1-208ENST00000404484 FAM43AQ8N2R8 423 aa24.02■■□□□ 1.44
TPM1-208ENST00000404484 LPAR1Q92633 364 aa24.02■■□□□ 1.44
TPM1-208ENST00000404484 CFHR5Q9BXR6 569 aa24.02■■□□□ 1.44
TPM1-208ENST00000404484 GLT8D2Q9H1C3 349 aa24.02■■□□□ 1.44
TPM1-208ENST00000404484 AS3MTQ9HBK9 375 aa24.02■■□□□ 1.44
TPM1-208ENST00000404484 MORC2Q9Y6X9 1032 aaPredicted RBP24.02■■□□□ 1.44
TPM1-208ENST00000404484 SMCO2A6NFE2 343 aa24.01■■□□□ 1.43
TPM1-208ENST00000404484 TMEM232C9JQI7 657 aa24.01■■□□□ 1.43
TPM1-208ENST00000404484 CXCL11O14625 94 aa24.01■■□□□ 1.43
TPM1-208ENST00000404484 PLA2G6O60733 806 aa24.01■■□□□ 1.43
TPM1-208ENST00000404484 STAT2P52630 851 aa24.01■■□□□ 1.43
TPM1-208ENST00000404484 CCDC183Q5T5S1 534 aa24.01■■□□□ 1.43
TPM1-208ENST00000404484 ADALQ6DHV7 355 aa24.01■■□□□ 1.43
TPM1-208ENST00000404484 CHURC1Q8WUH1 139 aa24.01■■□□□ 1.43
TPM1-208ENST00000404484 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.01■■□□□ 1.43
TPM1-208ENST00000404484 TMEM63CQ9P1W3 806 aa24.01■■□□□ 1.43
TPM1-208ENST00000404484 CCDC194A0A1B0GVG4 234 aa24■■□□□ 1.43
TPM1-208ENST00000404484 A0A1W2PQ27 194 aa24■■□□□ 1.43
TPM1-208ENST00000404484 A0A1W2PQ64 194 aa24■■□□□ 1.43
TPM1-208ENST00000404484 A0A1W2PQD8 194 aa24■■□□□ 1.43
TPM1-208ENST00000404484 BTBD19C9JJ37 291 aa24■■□□□ 1.43
TPM1-208ENST00000404484 TOB1P50616 345 aaPredicted RBP24■■□□□ 1.43
TPM1-208ENST00000404484 MOGSQ13724 837 aa24■■□□□ 1.43
TPM1-208ENST00000404484 PTPAQ15257 358 aa24■■□□□ 1.43
TPM1-208ENST00000404484 FAM160B2Q86V87 743 aa24■■□□□ 1.43
TPM1-208ENST00000404484 NUP88Q99567 741 aaPredicted RBP24■■□□□ 1.43
TPM1-208ENST00000404484 KIAA1683Q9H0B3 1180 aa24■■□□□ 1.43
TPM1-208ENST00000404484 M0R2N6 131 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 LETM1O95202 739 aaPredicted RBP23.99■■□□□ 1.43
TPM1-208ENST00000404484 ADCY7P51828 1080 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 CDC37Q16543 378 aaPredicted RBP23.99■■□□□ 1.43
TPM1-208ENST00000404484 ZSCAN23Q3MJ62 389 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 PIK3AP1Q6ZUJ8 805 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 KRT25Q7Z3Z0 450 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 SPICE1Q8N0Z3 855 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 PCDHA7Q9UN72 937 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 USP14P54578 494 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 QRICH1Q2TAL8 776 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 TPRNQ4KMQ1 711 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 CCDC73Q6ZRK6 1079 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 WDR18Q9BV38 432 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 DDX19AQ9NUU7 478 aaKnown RBP23.99■■□□□ 1.43
TPM1-208ENST00000404484 FEM1BQ9UK73 627 aa23.99■■□□□ 1.43
TPM1-208ENST00000404484 GPR25O00155 361 aa23.98■■□□□ 1.43
TPM1-208ENST00000404484 CRHR2Q13324 411 aa23.98■■□□□ 1.43
TPM1-208ENST00000404484 TTC38Q5R3I4 469 aa23.98■■□□□ 1.43
TPM1-208ENST00000404484 FAM83BQ5T0W9 1011 aa23.98■■□□□ 1.43
TPM1-208ENST00000404484 REXO1Q8N1G1 1221 aaKnown RBP23.98■■□□□ 1.43
TPM1-208ENST00000404484 PCDHA6Q9UN73 950 aa23.98■■□□□ 1.43
TPM1-208ENST00000404484 PCDHA8Q9Y5H6 950 aa23.98■■□□□ 1.43
TPM1-208ENST00000404484 A0A0G2JLL6 359 aaPredicted RBP23.97■■□□□ 1.43
TPM1-208ENST00000404484 WDR46O15213 610 aaKnown RBP23.97■■□□□ 1.43
TPM1-208ENST00000404484 SPP2Q13103 211 aa23.97■■□□□ 1.43
TPM1-208ENST00000404484 PRRT2Q7Z6L0 340 aaPredicted RBP23.97■■□□□ 1.43
TPM1-208ENST00000404484 CCAR1Q8IX12 1150 aaKnown RBP23.97■■□□□ 1.43
TPM1-208ENST00000404484 MRPS27Q92552 414 aaKnown RBP23.97■■□□□ 1.43
TPM1-208ENST00000404484 COA7Q96BR5 231 aa23.97■■□□□ 1.43
TPM1-208ENST00000404484 AMNQ9BXJ7 453 aa23.97■■□□□ 1.43
TPM1-208ENST00000404484 CUTAO60888 179 aa23.96■■□□□ 1.43
TPM1-208ENST00000404484 MRPL12P52815 198 aaKnown RBP23.96■■□□□ 1.43
TPM1-208ENST00000404484 ZNF445P59923 1031 aa23.96■■□□□ 1.43
TPM1-208ENST00000404484 ZYXQ15942 572 aaKnown RBP23.96■■□□□ 1.43
TPM1-208ENST00000404484 EARS2Q5JPH6 523 aaKnown RBP23.96■■□□□ 1.43
TPM1-208ENST00000404484 ZNF280CQ8ND82 737 aa23.96■■□□□ 1.43
TPM1-208ENST00000404484 ZNF296Q8WUU4 475 aaPredicted RBP23.96■■□□□ 1.43
TPM1-208ENST00000404484 CUL5Q93034 780 aa23.96■■□□□ 1.43
TPM1-208ENST00000404484 RIC8AQ9NPQ8 531 aa23.96■■□□□ 1.43
TPM1-208ENST00000404484 PRR12Q9ULL5 1215 aa23.96■■□□□ 1.43
TPM1-208ENST00000404484 PCDHB6Q9Y5E3 794 aa23.96■■□□□ 1.43
TPM1-208ENST00000404484 FAM205CA6NFA0 338 aa23.95■■□□□ 1.43
TPM1-208ENST00000404484 PPP1R11O60927 126 aaPredicted RBP23.95■■□□□ 1.43
TPM1-208ENST00000404484 LIG1P18858 919 aa23.95■■□□□ 1.43
TPM1-208ENST00000404484 ATP2B1P20020 1258 aa23.95■■□□□ 1.43
TPM1-208ENST00000404484 NOM1Q5C9Z4 860 aaKnown RBP23.95■■□□□ 1.43
TPM1-208ENST00000404484 KIAA1755Q5JYT7 1200 aa23.95■■□□□ 1.43
TPM1-208ENST00000404484 GPAT2Q6NUI2 795 aa23.95■■□□□ 1.43
TPM1-208ENST00000404484 FBXO11Q86XK2 927 aa23.95■■□□□ 1.43
TPM1-208ENST00000404484 TEX2Q8IWB9 1127 aa23.95■■□□□ 1.43
TPM1-208ENST00000404484 KRI1Q8N9T8 703 aaKnown RBP23.95■■□□□ 1.43
TPM1-208ENST00000404484 FSIP1Q8NA03 581 aa23.95■■□□□ 1.43
TPM1-208ENST00000404484 MARCKSP29966 332 aaPredicted RBP23.95■■□□□ 1.42
TPM1-208ENST00000404484 NONOQ15233 471 aaKnown RBP eCLIP23.95■■□□□ 1.42
TPM1-208ENST00000404484 TAF1CQ15572 869 aaPredicted RBP23.95■■□□□ 1.42
TPM1-208ENST00000404484 ANKRD23Q86SG2 305 aa23.95■■□□□ 1.42
TPM1-208ENST00000404484 PCDHA1Q9Y5I3 950 aa23.95■■□□□ 1.42
TPM1-208ENST00000404484 PHIPQ8WWQ0 1821 aa23.94■■□□□ 1.42
TPM1-208ENST00000404484 CMA1P23946 247 aa23.94■■□□□ 1.42
TPM1-208ENST00000404484 FAM160A1Q05DH4 1040 aa23.94■■□□□ 1.42
TPM1-208ENST00000404484 AXDND1Q5T1B0 1012 aaPredicted RBP23.94■■□□□ 1.42
TPM1-208ENST00000404484 MCTP2Q6DN12 878 aa23.94■■□□□ 1.42
TPM1-208ENST00000404484 FASTKD5Q7L8L6 764 aaKnown RBP23.94■■□□□ 1.42
TPM1-208ENST00000404484 TNS4Q8IZW8 715 aa23.94■■□□□ 1.42
TPM1-208ENST00000404484 RASGRP4Q8TDF6 673 aa23.94■■□□□ 1.42
TPM1-208ENST00000404484 ZFYVE28Q9HCC9 887 aa23.94■■□□□ 1.42
TPM1-208ENST00000404484 ZCCHC17Q9NP64 241 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms