RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SEC31BQ9NQW1 1179 aa15.08■□□□□ 0
VAPA-202ENST00000400000 TSPOAP1O95153 1857 aa15.08■□□□□ 0
VAPA-202ENST00000400000 MESDQ14696 234 aa15.08■□□□□ 0
VAPA-202ENST00000400000 TLR3O15455 904 aaKnown RBP15.08■□□□□ 0
VAPA-202ENST00000400000 SGSM2O43147 1006 aa15.08■□□□□ 0
VAPA-202ENST00000400000 CTNNA1P35221 906 aaKnown RBP15.08■□□□□ 0
VAPA-202ENST00000400000 SKIV2LQ15477 1246 aaKnown RBP15.08■□□□□ 0
VAPA-202ENST00000400000 PRAMEF22A3QJZ6 481 aa15.08■□□□□ 0
VAPA-202ENST00000400000 RSRC2Q7L4I2 434 aaKnown RBP15.08■□□□□ 0
VAPA-202ENST00000400000 BAIAP2L1Q9UHR4 511 aa15.08■□□□□ 0
VAPA-202ENST00000400000 OAS2P29728 719 aaKnown RBP15.07■□□□□ 0
VAPA-202ENST00000400000 SMAD1Q15797 465 aaKnown RBP15.07■□□□□ 0
VAPA-202ENST00000400000 KIAA1841Q6NSI8 718 aa15.07■□□□□ 0
VAPA-202ENST00000400000 CCNYQ8ND76 341 aa15.07■□□□□ 0
VAPA-202ENST00000400000 ARPP21Q9UBL0 812 aaPredicted RBP15.07■□□□□ 0
VAPA-202ENST00000400000 MX2P20592 715 aa15.07■□□□□ 0
VAPA-202ENST00000400000 FAM149B1Q96BN6 582 aa15.07■□□□□ 0
VAPA-202ENST00000400000 MTRQ99707 1265 aa15.07■□□□□ 0
VAPA-202ENST00000400000 ATP10BO94823 1461 aa15.07■□□□□ 0
VAPA-202ENST00000400000 SETD1BQ9UPS6 1966 aaKnown RBP15.07■□□□□ 0
VAPA-202ENST00000400000 RGS16O15492 202 aaPredicted RBP15.07■□□□□ 0
VAPA-202ENST00000400000 ZMYND10O75800 440 aa15.07■□□□□ 0
VAPA-202ENST00000400000 PHKA1P46020 1223 aa15.07■□□□□ 0
VAPA-202ENST00000400000 ANKRD20A3Q5VUR7 823 aa15.07■□□□□ 0
VAPA-202ENST00000400000 FRMD3A2A2Y4 597 aa15.07■□□□□ 0
VAPA-202ENST00000400000 KIF3CO14782 793 aa15.07■□□□□ 0
VAPA-202ENST00000400000 INPP5BP32019 993 aa15.07■□□□□ 0
VAPA-202ENST00000400000 CLNS1AP54105 237 aaKnown RBP15.07■□□□□ 0
VAPA-202ENST00000400000 LGSNQ5TDP6 509 aa15.07■□□□□ 0
VAPA-202ENST00000400000 SYCE1Q8N0S2 351 aa15.07■□□□□ 0
VAPA-202ENST00000400000 MLKLQ8NB16 471 aa15.07■□□□□ 0
VAPA-202ENST00000400000 ATP2A3Q93084 1043 aa15.07■□□□□ 0
VAPA-202ENST00000400000 SPDL1Q96EA4 605 aa15.07■□□□□ 0
VAPA-202ENST00000400000 CCDC94Q9BW85 323 aaPredicted RBP15.07■□□□□ 0
VAPA-202ENST00000400000 NXF1Q9UBU9 619 aaKnown RBP15.07■□□□□ 0
VAPA-202ENST00000400000 RABGAP1Q9Y3P9 1069 aa15.07■□□□□ 0
VAPA-202ENST00000400000 TNKSO95271 1327 aa15.07■□□□□ 0
VAPA-202ENST00000400000 INTS4Q96HW7 963 aaKnown RBP15.07■□□□□ 0
VAPA-202ENST00000400000 ZNF668Q96K58 619 aaPredicted RBP15.07■□□□□ 0
VAPA-202ENST00000400000 HESX1Q9UBX0 185 aa15.07■□□□□ 0
VAPA-202ENST00000400000 SRP68Q9UHB9 627 aaKnown RBP15.07■□□□□ 0
VAPA-202ENST00000400000 MRPL11Q9Y3B7 192 aaKnown RBP15.07■□□□□ 0
VAPA-202ENST00000400000 AP5M1Q9H0R1 490 aa15.06■□□□□ 0
VAPA-202ENST00000400000 CD58P19256 250 aa15.06■□□□□ 0
VAPA-202ENST00000400000 DCAF15Q66K64 600 aa15.06■□□□□ 0
VAPA-202ENST00000400000 GRAMD1CQ8IYS0 662 aa15.06■□□□□ 0
VAPA-202ENST00000400000 PDZD8Q8NEN9 1154 aa15.06■□□□□ 0
VAPA-202ENST00000400000 CCDC68Q9H2F9 335 aa15.06■□□□□ 0
VAPA-202ENST00000400000 ANAPC5Q9UJX4 755 aa15.06■□□□□ 0
VAPA-202ENST00000400000 ZNF148Q9UQR1 794 aa15.06■□□□□ 0
VAPA-202ENST00000400000 RASSF7Q02833 373 aa15.06■□□□□ 0
VAPA-202ENST00000400000 MMEL1Q495T6 779 aa15.06■□□□□ 0
VAPA-202ENST00000400000 KDM2BQ8NHM5 1336 aa15.06■□□□□ 0
VAPA-202ENST00000400000 A6NJR5 290 aa15.06■□□□□ 0
VAPA-202ENST00000400000 SMIM24O75264 130 aa15.06■□□□□ 0
VAPA-202ENST00000400000 KCTD2Q14681 263 aa15.06■□□□□ 0
VAPA-202ENST00000400000 TRIP13Q15645 432 aaPredicted RBP15.06■□□□□ 0
VAPA-202ENST00000400000 SYMPKQ92797 1274 aaKnown RBP15.06■□□□□ 0
VAPA-202ENST00000400000 ZNF577Q9BSK1 485 aa15.06■□□□□ 0
VAPA-202ENST00000400000 ENC1O14682 589 aa15.06■□□□□ 0
VAPA-202ENST00000400000 ADAM9Q13443 819 aa15.06■□□□□ 0
VAPA-202ENST00000400000 COA7Q96BR5 231 aa15.06■□□□□ 0
VAPA-202ENST00000400000 ZBED2Q9BTP6 218 aa15.06■□□□□ 0
VAPA-202ENST00000400000 MYL3P08590 195 aa15.06■□□□□ 0
VAPA-202ENST00000400000 SRGAP2CP0DJJ0 459 aa15.06■□□□□ 0
VAPA-202ENST00000400000 CACNB3P54284 484 aa15.06■□□□□ 0
VAPA-202ENST00000400000 CABS1Q96KC9 395 aa15.06■□□□□ 0
VAPA-202ENST00000400000 HAUS2Q9NVX0 235 aa15.06■□□□□ 0
VAPA-202ENST00000400000 BTBD18B2RXH4 712 aa15.05■□□□□ 0
VAPA-202ENST00000400000 CDC25AP30304 524 aa15.05■□□□□ 0
VAPA-202ENST00000400000 YWHAGP61981 247 aaKnown RBP eCLIP15.05■□□□□ 0
VAPA-202ENST00000400000 RCN2Q14257 317 aa15.05■□□□□ 0
VAPA-202ENST00000400000 HABP4Q5JVS0 413 aaKnown RBP15.05■□□□□ 0
VAPA-202ENST00000400000 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ 0
VAPA-202ENST00000400000 TBC1D22AQ8WUA7 517 aa15.05■□□□□ 0
VAPA-202ENST00000400000 EXT2Q93063 718 aa15.05■□□□□ 0
VAPA-202ENST00000400000 M0R2C6 588 aa15.05■□□□□ 0
VAPA-202ENST00000400000 ZBTB7AO95365 584 aa15.05■□□□□ 0
VAPA-202ENST00000400000 CLCN1P35523 988 aa15.05■□□□□ 0
VAPA-202ENST00000400000 EIF4A1P60842 406 aaKnown RBP15.05■□□□□ 0
VAPA-202ENST00000400000 WHAMMQ8TF30 809 aa15.05■□□□□ 0
VAPA-202ENST00000400000 SLITRK6Q9H5Y7 841 aa15.05■□□□□ 0
VAPA-202ENST00000400000 TLR7Q9NYK1 1049 aaKnown RBP15.05■□□□□ 0
VAPA-202ENST00000400000 PCDHA1Q9Y5I3 950 aa15.05■□□□□ 0
VAPA-202ENST00000400000 HMGXB3Q12766 1538 aa15.05■□□□□ -0
VAPA-202ENST00000400000 CYP2D7A0A087X1C5 515 aa15.05■□□□□ -0
VAPA-202ENST00000400000 HADHQ16836 314 aaKnown RBP15.05■□□□□ -0
VAPA-202ENST00000400000 ANO4Q32M45 955 aa15.05■□□□□ -0
VAPA-202ENST00000400000 HAUS1Q96CS2 278 aa15.05■□□□□ -0
VAPA-202ENST00000400000 LLPHQ9BRT6 129 aaKnown RBP15.05■□□□□ -0
VAPA-202ENST00000400000 ANGPTL3Q9Y5C1 460 aa15.05■□□□□ -0
VAPA-202ENST00000400000 UBE2SQ16763 222 aa15.05■□□□□ -0
VAPA-202ENST00000400000 MTERF2Q49AM1 385 aa15.05■□□□□ -0
VAPA-202ENST00000400000 SBNO1A3KN83 1393 aa15.05■□□□□ -0
VAPA-202ENST00000400000 FMNL1O95466 1100 aaPredicted RBP15.05■□□□□ -0
VAPA-202ENST00000400000 ATP2B4P23634 1241 aa15.05■□□□□ -0
VAPA-202ENST00000400000 TFAMQ00059 246 aaKnown RBP15.05■□□□□ -0
VAPA-202ENST00000400000 LRCH2Q5VUJ6 765 aa15.05■□□□□ -0
VAPA-202ENST00000400000 GDAP1Q8TB36 358 aa15.05■□□□□ -0
VAPA-202ENST00000400000 ATP6V1E2Q96A05 226 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms