RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 PHACTR3Q96KR7 559 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 RNF14Q9UBS8 474 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 BIRC3Q13489 604 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 ANO6Q4KMQ2 910 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 FAM133BQ5BKY9 247 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 PACSIN1Q9BY11 444 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 ELP1O95163 1332 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 VCAM1P19320 739 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 ANGPTL8Q6UXH0 198 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 TADA2BQ86TJ2 420 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 UBE4BO95155 1302 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 LDHCP07864 332 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 MAP4P27816 1152 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 SOX6P35712 828 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 NLRP6P59044 892 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 TNFAIP2Q03169 654 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 TRIM11Q96F44 468 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 CAPS2Q9BXY5 557 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 ZNF148Q9UQR1 794 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 MYO9BQ13459 2157 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 S100A6P06703 90 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 METAP2P50579 478 aaKnown RBP eCLIP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 TRIP4Q15650 581 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 CHD1LQ86WJ1 897 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 SMCR8Q8TEV9 937 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 OTULINQ96BN8 352 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 MFSD6Q6ZSS7 791 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 DHX38Q92620 1227 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 CYLC2Q14093 348 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 GRAMD1BQ3KR37 738 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 PRPF6O94906 941 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 CASP10Q92851 521 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 NCLNQ969V3 563 aa9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 MRPL48Q96GC5 212 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-220ENST00000399655 ZBTB39O15060 712 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 ANGPT2O15123 496 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 PEX1O43933 1283 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 KRT9P35527 623 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 RCN2Q14257 317 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 PANK3Q9H999 370 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 TRIM17Q9Y577 477 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 GNA11P29992 359 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 KLHL40Q2TBA0 621 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 GLT8D2Q9H1C3 349 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 FAM81BQ96LP2 452 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 ABCF2Q9UG63 623 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 ZC3H7BQ9UGR2 993 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 INHBAP08476 426 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 SLFN14P0C7P3 912 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 EIF2S3LQ2VIR3 472 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 SECISBP2LQ93073 1101 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 PPP1R13BQ96KQ4 1090 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 SPAG17Q6Q759 2223 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 AP2B1P63010 937 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 TERF2Q15554 542 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 RAPH1Q70E73 1250 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 MGARPQ8TDB4 240 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 KIFC1Q9BW19 673 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 RPAP3Q9H6T3 665 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 LMCD1Q9NZU5 365 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 RTL1A6NKG5 1358 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 CCDC166P0CW27 439 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 EEF1GP26641 437 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 KCNA1Q09470 495 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 MTERF3Q96E29 417 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 MNTQ99583 582 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 TAF4O00268 1085 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 STRN3Q13033 797 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 DCAF17Q5H9S7 520 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 KRT79Q5XKE5 535 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 ARHGEF18Q6ZSZ5 1173 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 TAF8Q7Z7C8 310 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 RTL9Q8NET4 1388 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 EFR3AQ14156 821 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 AGBL1Q96MI9 1066 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 PLEKHH2Q8IVE3 1493 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 TCHHQ07283 1943 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 ECDO95905 644 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 KRT1P04264 644 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 DAB2IPQ5VWQ8 1189 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 PEX26Q7Z412 305 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 FAM212AQ96EL1 285 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 RRM2BQ7LG56 351 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 AP1S3Q96PC3 154 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 ARIH2O95376 493 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 PDE6BP35913 854 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 ATL3Q6DD88 541 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 TRIM39Q9HCM9 518 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 PKD2L2Q9NZM6 624 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 SLC8A2Q9UPR5 921 aa9.31□□□□□ -0.92
CACNA1C-220ENST00000399655 KLHL18O94889 574 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 KRT16P08779 473 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 TGFBR2P37173 567 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 FBXO42Q6P3S6 717 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 LVRNQ6Q4G3 990 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 SNX19Q92543 992 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 STOML1Q9UBI4 398 aa9.3□□□□□ -0.92
CACNA1C-220ENST00000399655 L3MBTL1Q9Y468 752 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms