RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 SASH1O94885 1247 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 HEXIM1O94992 359 aaKnown RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 MECOMQ03112 1051 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 ANO6Q4KMQ2 910 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 CFAP157Q5JU67 520 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 FAM178BQ8IXR5 827 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 NUCKS1Q9H1E3 243 aaKnown RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 SYNRGQ9UMZ2 1314 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 SPDYE16A6NNV3 312 aaPredicted RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 TNFAIP2Q03169 654 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 SNW1Q13573 536 aaKnown RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 SPDYE2Q495Y8 402 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 CNGA4Q8IV77 575 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 MAGEF1Q9HAY2 307 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 COPRSQ9NQ92 184 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 DIP2BQ9P265 1576 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 ABCB11O95342 1321 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 ITKQ08881 620 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 HADHQ16836 314 aaKnown RBP8.76□□□□□ -1.01
USP47-203ENST00000399455 GEN1Q17RS7 908 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 DYMQ7RTS9 669 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 TTC30AQ86WT1 665 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 CSGALNACT2Q8N6G5 542 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 AOPEPQ8N6M6 819 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 POMGNT1Q8WZA1 660 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 KCNH3Q9ULD8 1083 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 PPP1R21Q6ZMI0 780 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 TBC1D32Q96NH3 1257 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 TRERF1Q96PN7 1200 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 ELP3Q9H9T3 547 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 KMT5AQ9NQR1 393 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 GPSM2P81274 684 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 CALCOCO2Q13137 446 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 TTC14Q96N46 770 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 MYL10Q9BUA6 226 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 TMX1Q9H3N1 280 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 ITSN1Q15811 1721 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 SETD1BQ9UPS6 1966 aaKnown RBP8.76□□□□□ -1.01
USP47-203ENST00000399455 CDHR2Q9BYE9 1310 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 PTGS1P23219 599 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 GTF2A2P52657 109 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 SMC1BQ8NDV3 1235 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 PCDHB15Q9Y5E8 787 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 GOLGA8HP0CJ92 632 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 SARNPP82979 210 aaKnown RBP8.76□□□□□ -1.01
USP47-203ENST00000399455 PPP1R2P3Q6NXS1 205 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 SYCE1Q8N0S2 351 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 NDUFAF2Q8N183 169 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 CPSF3Q9UKF6 684 aaKnown RBP8.76□□□□□ -1.01
USP47-203ENST00000399455 PAXBP1Q9Y5B6 917 aa8.76□□□□□ -1.01
USP47-203ENST00000399455 PNMA6EA0A0J9YXQ4 647 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 CTAGE9A4FU28 777 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 CYP19A1P11511 503 aaPredicted RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 NEDD9Q14511 834 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 RYBPQ8N488 228 aaPredicted RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 PI4K2BQ8TCG2 481 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 KCNQ2O43526 872 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 CHRNA5P30532 468 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 CYP2J2P51589 502 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 STX17P56962 302 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 HUNKP57058 714 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 TKFCQ3LXA3 575 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 DSTYKQ6XUX3 929 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 RSRC2Q7L4I2 434 aaKnown RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 FANCBQ8NB91 859 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 CCDC26Q8TAB7 109 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 ACCSQ96QU6 501 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 GDPD2Q9HCC8 539 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 HERC5Q9UII4 1024 aaKnown RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 PRR36Q9H6K5 1346 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 WDR64B1ANS9 1081 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 PDE6CP51160 858 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 LACTBP83111 547 aaPredicted RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 DNM1Q05193 864 aaKnown RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 PHKBQ93100 1093 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 ZNF274Q96GC6 653 aaPredicted RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 SLITRK6Q9H5Y7 841 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 PPANQ9NQ55 473 aaKnown RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 ST7Q9NRC1 585 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 TECP42680 631 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 CDC37Q16543 378 aaPredicted RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 RNF219Q5W0B1 726 aaPredicted RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 EEPD1Q7L9B9 569 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 PCDHA4Q9UN74 947 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 TTLL3Q9Y4R7 772 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 MED7O43513 233 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 SNRNP48Q6IEG0 339 aaKnown RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 CTR9Q6PD62 1173 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 SNX21Q969T3 373 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 IRAK4Q9NWZ3 460 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 MAP3K20Q9NYL2 800 aaKnown RBP8.75□□□□□ -1.01
USP47-203ENST00000399455 SPATA31E1Q6ZUB1 1445 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 CCDC66A2RUB6 948 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 C19orf81C9J6K1 198 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 ATP5DP30049 168 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 ADORA1P30542 326 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 SCARF1Q14162 830 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 ERCC6LQ2NKX8 1250 aa8.75□□□□□ -1.01
USP47-203ENST00000399455 PDXDC2PQ6P474 469 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms