RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 CHD1O14646 1710 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 EIF4A3P38919 411 aaKnown RBP16.43■□□□□ 0.22
ITSN1-210ENST00000399353 UBA7P41226 1012 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 SESN3P58005 492 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 MIGA1Q8NAN2 632 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 GSDMAQ96QA5 445 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 TSC22D3Q99576 134 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 AP1M1Q9BXS5 423 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 KCNK3O14649 394 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 ACTN4O43707 911 aaKnown RBP16.43■□□□□ 0.22
ITSN1-210ENST00000399353 NLRP5P59047 1200 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 RPUSD2Q8IZ73 545 aaKnown RBP16.43■□□□□ 0.22
ITSN1-210ENST00000399353 NOX5Q96PH1 765 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 OSBPL7Q9BZF2 842 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 COPRSQ9NQ92 184 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 UBN2Q6ZU65 1347 aa16.43■□□□□ 0.22
ITSN1-210ENST00000399353 CLSTN1O94985 981 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 PRCPP42785 496 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 PTGDRQ13258 359 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 SPRED3Q2MJR0 410 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 SOGA3Q5TF21 947 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 PAPD7Q5XG87 772 aaKnown RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 RUFY4Q6ZNE9 571 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 NOP53Q9NZM5 478 aaKnown RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 EYA2O00167 538 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 SLCO1A2P46721 670 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 MB21D2Q8IYB1 491 aaPredicted RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 KLHL29Q96CT2 875 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 NUCKS1Q9H1E3 243 aaKnown RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 LEMD3Q9Y2U8 911 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 SRPRBQ9Y5M8 271 aaKnown RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 USP6P35125 1406 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 HMGB1P1B2RPK0 211 aaPredicted RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 TOB1P50616 345 aaPredicted RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 MDM2Q00987 491 aaPredicted RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 ANKRD20A8PQ5CZ79 823 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 PIK3AP1Q6ZUJ8 805 aa16.42■□□□□ 0.22
ITSN1-210ENST00000399353 ZNF483Q8TF39 744 aaPredicted RBP16.42■□□□□ 0.22
ITSN1-210ENST00000399353 PPP1R3GB7ZBB8 358 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 H0Y3Z8 333 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 RASSF9O75901 435 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 NEFHP12036 1026 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 XAGE2Q96GT9 111 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 ATP6V0A4Q9HBG4 840 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 MLXIPLQ9NP71 852 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 A1CFQ9NQ94 594 aaKnown RBP16.41■□□□□ 0.22
ITSN1-210ENST00000399353 PCDHA13Q9Y5I0 950 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 TNNC1P63316 161 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 LACTBP83111 547 aaPredicted RBP16.41■□□□□ 0.22
ITSN1-210ENST00000399353 ADCY1Q08828 1119 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 KDM7AQ6ZMT4 941 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 FNBP4Q8N3X1 1017 aaPredicted RBP16.41■□□□□ 0.22
ITSN1-210ENST00000399353 TSGA10Q9BZW7 698 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 TRPC6Q9Y210 931 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 ATP8A1Q9Y2Q0 1164 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 KIAA1210Q9ULL0 1709 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 ATP6V1G2O95670 118 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 MMP1P03956 469 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 EPS15P42566 896 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 RBM5P52756 815 aaKnown RBP eCLIP16.41■□□□□ 0.22
ITSN1-210ENST00000399353 HAUS3Q68CZ6 603 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 PRCCQ92733 491 aaPredicted RBP16.41■□□□□ 0.22
ITSN1-210ENST00000399353 PAIP2Q9BPZ3 127 aaKnown RBP16.41■□□□□ 0.22
ITSN1-210ENST00000399353 EXOC1Q9NV70 894 aa16.41■□□□□ 0.22
ITSN1-210ENST00000399353 TRMT112Q9UI30 125 aaKnown RBP16.41■□□□□ 0.22
ITSN1-210ENST00000399353 A0A087X0B3 334 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 TBC1D10CQ8IV04 446 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 RPN1P04843 607 aaKnown RBP16.4■□□□□ 0.22
ITSN1-210ENST00000399353 ATF3P18847 181 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 RWDD2BP57060 319 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 ASIC1P78348 528 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 SKOR1P84550 965 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 CCDC25Q86WR0 208 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 APPBP2Q92624 585 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 ORAI2Q96SN7 254 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 ZFYP08048 801 aaPredicted RBP16.4■□□□□ 0.22
ITSN1-210ENST00000399353 ATP11AP98196 1134 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 MAP3K12Q12852 859 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 SLC30A9Q6PML9 568 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 CREG2Q8IUH2 290 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 GOLPH3Q9H4A6 298 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 ZHX3Q9H4I2 956 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 ETAA1Q9NY74 926 aa16.4■□□□□ 0.22
ITSN1-210ENST00000399353 SNUPNO95149 360 aaKnown RBP16.39■□□□□ 0.22
ITSN1-210ENST00000399353 KCNK9Q9NPC2 374 aa16.39■□□□□ 0.22
ITSN1-210ENST00000399353 RMND1Q9NWS8 449 aa16.39■□□□□ 0.22
ITSN1-210ENST00000399353 DNM2P50570 870 aa16.39■□□□□ 0.21
ITSN1-210ENST00000399353 KIF11P52732 1056 aa16.39■□□□□ 0.21
ITSN1-210ENST00000399353 TTLL7Q6ZT98 887 aa16.39■□□□□ 0.21
ITSN1-210ENST00000399353 KRT28Q7Z3Y7 464 aa16.39■□□□□ 0.21
ITSN1-210ENST00000399353 RAPGEF5Q92565 580 aa16.39■□□□□ 0.21
ITSN1-210ENST00000399353 LRRC45Q96CN5 670 aa16.39■□□□□ 0.21
ITSN1-210ENST00000399353 PRDM11Q9NQV5 511 aa16.39■□□□□ 0.21
ITSN1-210ENST00000399353 TRIM37O94972 964 aa16.39■□□□□ 0.21
ITSN1-210ENST00000399353 GFPT1Q06210 699 aaPredicted RBP16.39■□□□□ 0.21
ITSN1-210ENST00000399353 DHX9Q08211 1270 aaKnown RBP16.39■□□□□ 0.21
ITSN1-210ENST00000399353 TTC38Q5R3I4 469 aa16.39■□□□□ 0.21
ITSN1-210ENST00000399353 LONP2Q86WA8 852 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms