RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 GHRHRQ02643 423 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 CALML4Q96GE6 196 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 CSRNP1Q96S65 589 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 SGIP1Q9BQI5 828 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 RANBP17Q9H2T7 1088 aaKnown RBP8.34□□□□□ -1.07
RGPD1-201ENST00000398193 ABCB11O95342 1321 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 FRMPD2Q68DX3 1309 aaPredicted RBP8.34□□□□□ -1.07
RGPD1-201ENST00000398193 GOLGA8HP0CJ92 632 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 INF2Q27J81 1249 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 SLC4A8Q2Y0W8 1093 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 SPATA1Q5VX52 437 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 RRAGBQ5VZM2 374 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 ZSCAN29Q8IWY8 852 aaPredicted RBP8.34□□□□□ -1.07
RGPD1-201ENST00000398193 ZFPM1Q8IX07 1006 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 CHURC1Q8WUH1 139 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 IQCDQ96DY2 449 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 hCG_1642624A0A1W2PR95 340 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 CCNT1O60563 726 aaKnown RBP8.34□□□□□ -1.07
RGPD1-201ENST00000398193 ZNF18P17022 549 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 CDC37Q16543 378 aaPredicted RBP8.34□□□□□ -1.07
RGPD1-201ENST00000398193 FCHSD1Q86WN1 690 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 DHX58Q96C10 678 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 PSTPIP2Q9H939 334 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 KBTBD4Q9NVX7 518 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 LOC285556D6RIA3 1793 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 CALCRLQ16602 461 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 TBCKQ8TEA7 893 aa8.34□□□□□ -1.07
RGPD1-201ENST00000398193 TDRD3Q9H7E2 651 aaKnown RBP8.34□□□□□ -1.07
RGPD1-201ENST00000398193 GRIN1Q05586 938 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 PSMD2Q13200 908 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 TPRNQ4KMQ1 711 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 TMEM119Q4V9L6 283 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 CABP7Q86V35 215 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 SIAH1Q8IUQ4 282 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 DRC7Q8IY82 874 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 ZBTB21Q9ULJ3 1066 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 CIITAP33076 1130 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 FANCCQ00597 558 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 STIM1Q13586 685 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 CUL4BQ13620 913 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 LPAR1Q92633 364 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 NT5C3AQ9H0P0 336 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 MYOZ2Q9NPC6 264 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 ZNF277Q9NRM2 450 aaPredicted RBP8.33□□□□□ -1.08
RGPD1-201ENST00000398193 ITIH6Q6UXX5 1313 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 FZD9O00144 591 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 RHOBTB3O94955 611 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 PRR29P0C7W0 189 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 EPSTI1Q96J88 318 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 A0A087X0B3 334 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 PVALEFA0A1B0GWK0 134 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 RPN1P04843 607 aaKnown RBP8.33□□□□□ -1.08
RGPD1-201ENST00000398193 UBA7P41226 1012 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 EIF6P56537 245 aaKnown RBP8.33□□□□□ -1.08
RGPD1-201ENST00000398193 FBXO11Q86XK2 927 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 APOBEC3FQ8IUX4 373 aaKnown RBP8.33□□□□□ -1.08
RGPD1-201ENST00000398193 CRYGNQ8WXF5 182 aa8.33□□□□□ -1.08
RGPD1-201ENST00000398193 DHTKD1Q96HY7 919 aaPredicted RBP8.33□□□□□ -1.08
RGPD1-201ENST00000398193 F5H6K3 240 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 KIF2AO00139 706 aaPredicted RBP8.32□□□□□ -1.08
RGPD1-201ENST00000398193 CAP2P40123 477 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 KLRC3Q07444 240 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 PPP1R11O60927 126 aaPredicted RBP8.32□□□□□ -1.08
RGPD1-201ENST00000398193 USP14P54578 494 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 TRIM14Q14142 442 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 QRICH1Q2TAL8 776 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 THAP9Q9H5L6 903 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 PITPNM2Q9BZ72 1349 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 SYNRGQ9UMZ2 1314 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 BICDL2A1A5D9 508 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 PPP1R3GB7ZBB8 358 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 USP17L10C9JJH3 530 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 CTNND1O60716 968 aaKnown RBP8.32□□□□□ -1.08
RGPD1-201ENST00000398193 NDUFB10O96000 172 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 ASNSP08243 561 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 SREBF1P36956 1147 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 VSTM4Q8IW00 320 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 KIAA1524Q8TCG1 905 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 HSD3B7Q9H2F3 369 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 KCNMB3Q9NPA1 279 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 BIN2Q9UBW5 565 aaPredicted RBP8.32□□□□□ -1.08
RGPD1-201ENST00000398193 DDX25Q9UHL0 483 aaKnown RBP8.32□□□□□ -1.08
RGPD1-201ENST00000398193 MRPL11Q9Y3B7 192 aaKnown RBP8.32□□□□□ -1.08
RGPD1-201ENST00000398193 WNT7AO00755 349 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 STAT2P52630 851 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 CXCL9Q07325 125 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 TCP10Q12799 353 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 CDKAL1Q5VV42 579 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 FAM114A1Q8IWE2 563 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 ANKRD20A12PQ8NF67 263 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 FAM20AQ96MK3 541 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 UBA5Q9GZZ9 404 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 VCPKMTQ9H867 229 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 PAPPA2Q9BXP8 1791 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 TPM2P07951 284 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 DCAF15Q66K64 600 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 HOMER1Q86YM7 354 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 LRRC8AQ8IWT6 810 aa8.32□□□□□ -1.08
RGPD1-201ENST00000398193 LIMA1Q9UHB6 759 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms