RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 NOL8Q76FK4 1167 aaKnown RBP16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 RILPL2Q969X0 211 aa16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 RNPC3Q96LT9 517 aaKnown RBP16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 GUCD1Q96NT3 240 aa16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 RANBP17Q9H2T7 1088 aaKnown RBP16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 TCP11L1Q9NUJ3 509 aa16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 CYP39A1Q9NYL5 469 aa16.84■□□□□ 0.29
SNRNP25-203ENST00000397876 PCP11498 1178 aaKnown RBP16.83■□□□□ 0.28
SNRNP25-203ENST00000397876 HAND2P61296 217 aa16.83■□□□□ 0.28
SNRNP25-203ENST00000397876 SYDE2Q5VT97 1194 aa16.83■□□□□ 0.28
SNRNP25-203ENST00000397876 SMC5Q8IY18 1101 aa16.83■□□□□ 0.28
SNRNP25-203ENST00000397876 TMEM47Q9BQJ4 181 aa16.83■□□□□ 0.28
SNRNP25-203ENST00000397876 TBX21Q9UL17 535 aa16.83■□□□□ 0.28
SNRNP25-203ENST00000397876 FRMPD2Q68DX3 1309 aaPredicted RBP16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 TLR3O15455 904 aaKnown RBP16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 SLC16A2P36021 539 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 EPHB4P54760 987 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 NKX3-2P78367 333 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 AKNAD1Q5T1N1 836 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 TTBK2Q6IQ55 1244 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 B4GALNT3Q6L9W6 998 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 BTNL9Q6UXG8 535 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 MFSD6Q6ZSS7 791 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 TLK2Q86UE8 772 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 YTHDC1Q96MU7 727 aaKnown RBP16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 AP5M1Q9H0R1 490 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
SNRNP25-203ENST00000397876 ASTN1O14525 1302 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 ARVCFO00192 962 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 DLL1O00548 723 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 CTAGE5O15320 804 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 TIMP1P01033 207 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 CDK7P50613 346 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 BEX3Q00994 111 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 CHD1LQ86WJ1 897 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 FBXO16Q8IX29 292 aaPredicted RBP16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 VTA1Q9NP79 307 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 ADD3Q9UEY8 706 aaKnown RBP16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 PNMA2Q9UL42 364 aa16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 GNEQ9Y223 722 aaKnown RBP16.81■□□□□ 0.28
SNRNP25-203ENST00000397876 ZEB2O60315 1214 aa16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 CABYRO75952 493 aa16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 PDHBP11177 359 aa16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 SDSP20132 328 aa16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 FSCN1Q16658 493 aaKnown RBP16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 EEPD1Q7L9B9 569 aa16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 TBC1D10CQ8IV04 446 aa16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 ESR2Q92731 530 aa16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 TTC14Q96N46 770 aa16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 LAMA2P24043 3122 aaKnown RBP16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 LCTP09848 1927 aa16.8■□□□□ 0.28
SNRNP25-203ENST00000397876 SMPD1P17405 629 aa16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 PPIGQ13427 754 aaKnown RBP eCLIP16.79■□□□□ 0.289e-6■■□□□ 12.8
SNRNP25-203ENST00000397876 BAATQ14032 418 aaPredicted RBP16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 IQSEC1Q6DN90 963 aa16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 MFSD5Q6N075 450 aa16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 CXCL17Q6UXB2 119 aa16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 FAM126BQ8IXS8 530 aa16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 SEMA6BQ9H3T3 888 aa16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 OSBPL3Q9H4L5 887 aa16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 DIAPH3Q9NSV4 1193 aa16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 DDX49Q9Y6V7 483 aaKnown RBP16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
SNRNP25-203ENST00000397876 TMEM265A0A087WTH1 108 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 LOC102724159A0A0B4J2E5 919 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 PTPDC1A2A3K4 754 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 NFIBO00712 420 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 ZNF213O14771 459 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 DYNC1LI2O43237 492 aaPredicted RBP16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 NT5C2P49902 561 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 ALDH5A1P51649 535 aaPredicted RBP16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 NUCB1Q02818 461 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 ZNF543Q08ER8 600 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 PWP2Q15269 919 aaKnown RBP16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 TAPT1Q6NXT6 567 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 PLEKHM2Q8IWE5 1019 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 TMEM199Q8N511 208 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 MORC4Q8TE76 937 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 PURBQ96QR8 312 aaKnown RBP16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 CDX2Q99626 313 aaPredicted RBP16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 PPP1R12CQ9BZL4 782 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 PDGFCQ9NRA1 345 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 Q9Y3F1 56 aa16.78■□□□□ 0.28
SNRNP25-203ENST00000397876 NEDD4P46934 1319 aa16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 WDR19Q8NEZ3 1342 aa16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 HIP1O00291 1037 aa16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 SNHG28P0DPA3 235 aa16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 GPATCH4Q5T3I0 446 aaKnown RBP16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 SLC30A10Q6XR72 485 aa16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 SEZ6LQ9BYH1 1024 aa16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 TTYH1Q9H313 450 aaPredicted RBP16.77■□□□□ 0.28
SNRNP25-203ENST00000397876 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 CD4P01730 458 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms