RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ZMAT2Q96NC0 199 aaKnown RBP7.92□□□□□ -1.14
SMCO1-201ENST00000397537 NECAB3Q96P71 396 aaPredicted RBP7.92□□□□□ -1.14
SMCO1-201ENST00000397537 TM9SF2Q99805 663 aa7.92□□□□□ -1.14
SMCO1-201ENST00000397537 XPO4Q9C0E2 1151 aaKnown RBP7.92□□□□□ -1.14
SMCO1-201ENST00000397537 AGO4Q9HCK5 861 aaKnown RBP7.92□□□□□ -1.14
SMCO1-201ENST00000397537 DACH1Q9UI36 760 aa7.92□□□□□ -1.14
SMCO1-201ENST00000397537 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
SMCO1-201ENST00000397537 EFCAB5A4FU69 1503 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 ZMYM4Q5VZL5 1548 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 ALKQ9UM73 1620 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 SMTNL1A8MU46 457 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 ARIH2O95376 493 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 HOXD12P35452 270 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 IQSEC1Q6DN90 963 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 FASTKD5Q7L8L6 764 aaKnown RBP7.91□□□□□ -1.14
SMCO1-201ENST00000397537 CATIPQ7Z7H3 387 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 SCUBE1Q8IWY4 988 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 SH3KBP1Q96B97 665 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 KLRG1Q96E93 195 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 XAGE2Q96GT9 111 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 CEP44Q9C0F1 390 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 MIR1-1HGQ9H1L0 117 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 ZCCHC17Q9NP64 241 aaKnown RBP7.91□□□□□ -1.14
SMCO1-201ENST00000397537 ARHGAP28Q9P2N2 729 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 ZNF652Q9Y2D9 606 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 CRYL1Q9Y2S2 319 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 HRH3Q9Y5N1 445 aa7.91□□□□□ -1.14
SMCO1-201ENST00000397537 TRAV20A0A0B4J274 112 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 SYNDIG1LA6NDD5 238 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 KHNYNO15037 678 aaKnown RBP7.9□□□□□ -1.14
SMCO1-201ENST00000397537 RRP9O43818 475 aaKnown RBP7.9□□□□□ -1.14
SMCO1-201ENST00000397537 OPA1O60313 960 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 TIPRLO75663 272 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 RAC2P15153 192 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 KRT20P35900 424 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 PBX2P40425 430 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 ZNF252P-AS1Q0IIN9 211 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 PPFIA1Q13136 1202 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 RASIP1Q5U651 963 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 CCDC129Q6ZRS4 1044 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 SYDE1Q6ZW31 735 aaPredicted RBP7.9□□□□□ -1.14
SMCO1-201ENST00000397537 CYP2U1Q7Z449 544 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 C7orf61Q8IZ16 206 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 ZSCAN1Q8NBB4 408 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 FLCNQ8NFG4 579 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 DDX11Q96FC9 970 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 NUP88Q99567 741 aaPredicted RBP7.9□□□□□ -1.14
SMCO1-201ENST00000397537 SPSB2Q99619 263 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 BARD1Q99728 777 aaKnown RBP7.9□□□□□ -1.14
SMCO1-201ENST00000397537 PRR14Q9BWN1 585 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 NMRK2Q9NPI5 230 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 POLR3KQ9Y2Y1 108 aaPredicted RBP7.9□□□□□ -1.14
SMCO1-201ENST00000397537 SNX5Q9Y5X3 404 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 MAGI2Q86UL8 1455 aa7.9□□□□□ -1.14
SMCO1-201ENST00000397537 UGGT2Q9NYU1 1516 aa7.9□□□□□ -1.15
SMCO1-201ENST00000397537 ABCA8O94911 1581 aa7.9□□□□□ -1.15
SMCO1-201ENST00000397537 TRAPPC8Q9Y2L5 1435 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 TRIM75PA6NK02 468 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 TGFBR3LH3BV60 316 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 AREL1O15033 823 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 CTNND1O60716 968 aaKnown RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 IDH3AP50213 366 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 ZNF131P52739 623 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 SNX16P57768 344 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 HTRA3P83110 453 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 ZC3H12AQ5D1E8 599 aaKnown RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 KIAA1211LQ6NV74 962 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 ZCCHC8Q6NZY4 707 aaKnown RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 CYP26C1Q6V0L0 522 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 UBE2Q1Q7Z7E8 422 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 NBPF15Q8N660 670 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 ZNF784Q8NCA9 323 aaPredicted RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 DEPTORQ8TB45 409 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 IPCEF1Q8WWN9 437 aaPredicted RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 KLHL6Q8WZ60 621 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 TBC1D31Q96DN5 1066 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 SLC52A2Q9HAB3 445 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 RTCBQ9Y3I0 505 aaKnown RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 PTPRKQ15262 1439 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 RRN3P2A6NIE6 340 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 TRIM64CA6NLI5 447 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 ATE1O95260 518 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 ASLP04424 464 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 ZNF267Q14586 743 aaPredicted RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 TERF2Q15554 542 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 SLC45A4Q5BKX6 768 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 IQCEQ6IPM2 695 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 C11orf74Q86VG3 221 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 CMTR1Q8N1G2 835 aaKnown RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 C1orf162Q8NEQ5 155 aaPredicted RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 OR2W6PQ8NHA6 318 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 FAXDC2Q96IV6 333 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 RSRC1Q96IZ7 334 aaKnown RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 IPO9Q96P70 1041 aaKnown RBP7.89□□□□□ -1.15
SMCO1-201ENST00000397537 TBCBQ99426 244 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 ATP6V0A4Q9HBG4 840 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 SALL4Q9UJQ4 1053 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 VPS9D1Q9Y2B5 631 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 SYNRGQ9UMZ2 1314 aa7.89□□□□□ -1.15
SMCO1-201ENST00000397537 C3P01024 1663 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms