RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ABL1P00519 1130 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 GYS1P13807 737 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 TAL1P17542 331 aaPredicted RBP11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 MRPS25P82663 173 aaKnown RBP11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 STK4Q13043 487 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 CYP26C1Q6V0L0 522 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 GOLGA1Q92805 767 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 CCDC102AQ96A19 550 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 RTFDC1Q9BY42 306 aaPredicted RBP11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 RAB34Q9BZG1 259 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 NLRC4Q9NPP4 1024 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 RWDD2AQ9UIY3 292 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 DAGLAQ9Y4D2 1042 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 FAM237AA0A1B0GTK4 181 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 AKR1B10O60218 316 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 ARFGAP3Q9NP61 516 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 SERPINB13Q9UIV8 391 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 ADGRG1Q9Y653 693 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 TAF1P21675 1872 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 LRP6O75581 1613 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 NWD2Q9ULI1 1742 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 TTC26A0AVF1 554 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 TRAF5O00463 557 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 SPA17Q15506 151 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 TCERG1LQ5VWI1 586 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 CNOT6LQ96LI5 555 aaKnown RBP11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 KCNQ5Q9NR82 932 aa11.68□□□□□ -0.54
CPSF1P1-201ENST00000397477 USP17L10C9JJH3 530 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 PTPROQ16827 1216 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 PDXDC2PQ6P474 469 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 TRIM65Q6PJ69 517 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 TMTC1Q8IUR5 882 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 PKD2L1Q9P0L9 805 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 PCDHAC2Q9Y5I4 1007 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 H7C1D1 291 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 RNF225M0QZC1 329 aaPredicted RBP11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 ZMYND10O75800 440 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 APBA3O96018 575 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 NCAPH2Q6IBW4 605 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 SMAP1Q8IYB5 467 aaPredicted RBP11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 OR8K1Q8NGG5 319 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 TBC1D22AQ8WUA7 517 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 CCDC42Q96M95 316 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 EPN1Q9Y6I3 576 aaPredicted RBP11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 NUP188Q5SRE5 1749 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 CHMP2AO43633 222 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 SRGAP2O75044 1071 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 BBOX1O75936 387 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 GYS2P54840 703 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 NFIAQ12857 509 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 ARL6IP4Q66PJ3 421 aaKnown RBP11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 NEDD1Q8NHV4 660 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 ABHD10Q9NUJ1 306 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 HDAC6Q9UBN7 1215 aa11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 SCAF8Q9UPN6 1271 aaKnown RBP11.67□□□□□ -0.54
CPSF1P1-201ENST00000397477 NUP98P52948 1817 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 AKAP11Q9UKA4 1901 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 MYH2Q9UKX2 1941 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 PHLPP2Q6ZVD8 1323 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 CTAGE15A4D2H0 777 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 MEIS1O00470 390 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 CTAGE8P0CG41 777 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 RNASE9P60153 205 aaKnown RBP11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 UBXN2AP68543 259 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 CYP4A11Q02928 519 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 SLC35G1Q2M3R5 365 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 CTAGE6Q86UF2 777 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 C2CD5Q86YS7 1000 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 CTAGE4Q8IX94 777 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 TNFRSF25Q93038 417 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 PSTPIP2Q9H939 334 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 BAZ2AQ9UIF9 1905 aaKnown RBP11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 MMP10P09238 476 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 NT5DC1Q5TFE4 455 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 TEKT1Q969V4 418 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 AGPAT5Q9NUQ2 364 aa11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 DDX41Q9UJV9 622 aaKnown RBP11.66□□□□□ -0.54
CPSF1P1-201ENST00000397477 HERC4Q5GLZ8 1057 aaPredicted RBP11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 ANKRD40Q6AI12 368 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 SMCR8Q8TEV9 937 aaPredicted RBP11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 NAPGQ99747 312 aaPredicted RBP11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 LZTS2Q9BRK4 669 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 PARD6BQ9BYG5 372 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 PCDHA1Q9Y5I3 950 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 PPARDQ03181 441 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 E2F4Q16254 413 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 P2RX5Q93086 422 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 VEZTQ9HBM0 779 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 DDX25Q9UHL0 483 aaKnown RBP11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 KIAA1024Q9UPX6 916 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 PALM3A6NDB9 673 aaPredicted RBP11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 SLC37A4O43826 429 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 MRPL12P52815 198 aaKnown RBP11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 PLS1Q14651 629 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 PRR16Q569H4 304 aa11.65□□□□□ -0.54
CPSF1P1-201ENST00000397477 RRAGAQ7L523 313 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms