RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 A0A1W2PQ64 194 aa21.72■■□□□ 1.07
TSPAN4-204ENST00000397404 A0A1W2PQD8 194 aa21.72■■□□□ 1.07
TSPAN4-204ENST00000397404 PIK3AP1Q6ZUJ8 805 aa21.72■■□□□ 1.07
TSPAN4-204ENST00000397404 GTF3C2Q8WUA4 911 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-204ENST00000397404 EHMT1Q9H9B1 1298 aa21.72■■□□□ 1.07
TSPAN4-204ENST00000397404 NMRK2Q9NPI5 230 aa21.72■■□□□ 1.07
TSPAN4-204ENST00000397404 POTEIP0CG38 1075 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 POTEJP0CG39 1038 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 DSG3P32926 999 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 SNAPC2Q13487 334 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 NBR1Q14596 966 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 TKFCQ3LXA3 575 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 FZD1Q9UP38 647 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 RABGAP1Q9Y3P9 1069 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 PTPRFP10586 1907 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 ZBTB48P10074 688 aaPredicted RBP21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 ME1P48163 572 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 GHRHRQ02643 423 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 TTC38Q5R3I4 469 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 ARL6IP4Q66PJ3 421 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 LBX2Q6XYB7 198 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 FERMT2Q96AC1 680 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 OPTNQ96CV9 577 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 OTUD5Q96G74 571 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 GDPD2Q9HCC8 539 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 SLC45A1Q9Y2W3 748 aa21.71■■□□□ 1.07
TSPAN4-204ENST00000397404 VWA5AO00534 786 aa21.7■■□□□ 1.06
TSPAN4-204ENST00000397404 IRF6O14896 467 aa21.7■■□□□ 1.06
TSPAN4-204ENST00000397404 GCFC2P16383 781 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-204ENST00000397404 TOB1P50616 345 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-204ENST00000397404 PTPAQ15257 358 aa21.7■■□□□ 1.06
TSPAN4-204ENST00000397404 NEK8Q86SG6 692 aa21.7■■□□□ 1.06
TSPAN4-204ENST00000397404 ZNF579Q8NAF0 562 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-204ENST00000397404 AGTPBP1Q9UPW5 1226 aa21.7■■□□□ 1.06
TSPAN4-204ENST00000397404 CLIC4Q9Y696 253 aa21.7■■□□□ 1.06
TSPAN4-204ENST00000397404 CELF2O95319 508 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-204ENST00000397404 MOXD1Q6UVY6 613 aa21.69■■□□□ 1.06
TSPAN4-204ENST00000397404 FBXO28Q9NVF7 368 aa21.69■■□□□ 1.06
TSPAN4-204ENST00000397404 CCPG1Q9ULG6 757 aa21.69■■□□□ 1.06
TSPAN4-204ENST00000397404 PARP14Q460N5 1801 aa21.69■■□□□ 1.06
TSPAN4-204ENST00000397404 SPDYE3A6NKU9 549 aa21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 CUTAO60888 179 aa21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 ITGBL1O95965 494 aaPredicted RBP21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 COPB2P35606 906 aa21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 USP11P51784 963 aa21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 GTF2A2P52657 109 aa21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 KRI1Q8N9T8 703 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 GPBP1L1Q9HC44 474 aaPredicted RBP21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 PNMA3Q9UL41 463 aa21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 TRPM7Q96QT4 1865 aa21.68■■□□□ 1.06
TSPAN4-204ENST00000397404 GCOM1H8Y6P7 765 aaPredicted RBP21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 TRAF5O00463 557 aa21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 LETM1O95202 739 aaPredicted RBP21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 POLR2MP0CAP2 368 aa21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 CETPP11597 493 aa21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 CEBPZQ03701 1054 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 USH1GQ495M9 461 aa21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 PPP4R3AQ6IN85 833 aa21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 DLK2Q6UY11 383 aa21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 CLMNQ96JQ2 1002 aa21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 ZNF408Q9H9D4 720 aa21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 SRPRBQ9Y5M8 271 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-204ENST00000397404 MEIS2O14770 477 aa21.66■■□□□ 1.06
TSPAN4-204ENST00000397404 OSBPP22059 807 aa21.66■■□□□ 1.06
TSPAN4-204ENST00000397404 PRPHP41219 470 aa21.66■■□□□ 1.06
TSPAN4-204ENST00000397404 ATP2C1P98194 919 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-204ENST00000397404 CHAMP1Q96JM3 812 aa21.66■■□□□ 1.06
TSPAN4-204ENST00000397404 BIN2Q9UBW5 565 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-204ENST00000397404 PCDHB6Q9Y5E3 794 aa21.66■■□□□ 1.06
TSPAN4-204ENST00000397404 ZNF536O15090 1300 aa21.66■■□□□ 1.06
TSPAN4-204ENST00000397404 PTPREP23469 700 aa21.65■■□□□ 1.06
TSPAN4-204ENST00000397404 CMA1P23946 247 aa21.65■■□□□ 1.06
TSPAN4-204ENST00000397404 IRX3P78415 501 aaPredicted RBP21.65■■□□□ 1.06
TSPAN4-204ENST00000397404 CCDC174Q6PII3 467 aa21.65■■□□□ 1.06
TSPAN4-204ENST00000397404 TBCKQ8TEA7 893 aa21.65■■□□□ 1.06
TSPAN4-204ENST00000397404 PYM1Q9BRP8 204 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-204ENST00000397404 TEX13BQ9BXU2 312 aa21.65■■□□□ 1.06
TSPAN4-204ENST00000397404 DDX19AQ9NUU7 478 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-204ENST00000397404 PCDHA7Q9UN72 937 aa21.65■■□□□ 1.06
TSPAN4-204ENST00000397404 INF2Q27J81 1249 aa21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 EARS2Q5JPH6 523 aaKnown RBP21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 JAKMIP3Q5VZ66 844 aa21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 GADL1Q6ZQY3 521 aa21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 CCDC73Q6ZRK6 1079 aa21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 SMC1BQ8NDV3 1235 aa21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 GPT2Q8TD30 523 aa21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 MRPS27Q92552 414 aaKnown RBP21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 FBXO40Q9UH90 709 aa21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 RLFQ13129 1914 aa21.64■■□□□ 1.06
TSPAN4-204ENST00000397404 SPDYE16A6NNV3 312 aaPredicted RBP21.64■■□□□ 1.05
TSPAN4-204ENST00000397404 MOB2Q70IA6 237 aa21.64■■□□□ 1.05
TSPAN4-204ENST00000397404 REPS2Q8NFH8 660 aa21.64■■□□□ 1.05
TSPAN4-204ENST00000397404 RASGRP4Q8TDF6 673 aa21.64■■□□□ 1.05
TSPAN4-204ENST00000397404 ATG4CQ96DT6 458 aa21.64■■□□□ 1.05
TSPAN4-204ENST00000397404 WNK4Q96J92 1243 aa21.64■■□□□ 1.05
TSPAN4-204ENST00000397404 ANO3Q9BYT9 981 aa21.64■■□□□ 1.05
TSPAN4-204ENST00000397404 FTOQ9C0B1 505 aaKnown RBP eCLIP21.64■■□□□ 1.05
TSPAN4-204ENST00000397404 CYP3A7-CYP3A51PA0A087WV96 503 aa21.63■■□□□ 1.05
TSPAN4-204ENST00000397404 FAM237AA0A1B0GTK4 181 aa21.63■■□□□ 1.05
TSPAN4-204ENST00000397404 GADD45BO75293 160 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms