RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ANKRD35Q8N283 1001 aa16.15■□□□□ 0.18
SEC13-205ENST00000397101 NKX2-4Q9H2Z4 354 aa16.15■□□□□ 0.18
SEC13-205ENST00000397101 HIPK3Q9H422 1215 aa16.15■□□□□ 0.18
SEC13-205ENST00000397101 RAPGEFL1Q9UHV5 662 aa16.15■□□□□ 0.18
SEC13-205ENST00000397101 YBX2Q9Y2T7 364 aaKnown RBP16.15■□□□□ 0.18
SEC13-205ENST00000397101 BAZ2AQ9UIF9 1905 aaKnown RBP16.14■□□□□ 0.17
SEC13-205ENST00000397101 NDUFB10O96000 172 aa16.14■□□□□ 0.17
SEC13-205ENST00000397101 CHMLP26374 656 aa16.14■□□□□ 0.17
SEC13-205ENST00000397101 IRX5P78411 483 aaPredicted RBP16.14■□□□□ 0.17
SEC13-205ENST00000397101 GIMAP6Q6P9H5 292 aa16.14■□□□□ 0.17
SEC13-205ENST00000397101 RPUSD2Q8IZ73 545 aaKnown RBP16.14■□□□□ 0.17
SEC13-205ENST00000397101 MKL1Q969V6 931 aa16.14■□□□□ 0.17
SEC13-205ENST00000397101 FEM1BQ9UK73 627 aa16.14■□□□□ 0.17
SEC13-205ENST00000397101 GNEQ9Y223 722 aaKnown RBP16.14■□□□□ 0.17
SEC13-205ENST00000397101 PCDHA11Q9Y5I1 949 aa16.14■□□□□ 0.17
SEC13-205ENST00000397101 SLC4A4Q9Y6R1 1079 aa16.14■□□□□ 0.17
SEC13-205ENST00000397101 BDP1A6H8Y1 2624 aa16.14■□□□□ 0.17
SEC13-205ENST00000397101 RAD21O60216 631 aa16.13■□□□□ 0.17
SEC13-205ENST00000397101 HOXD11P31277 338 aaPredicted RBP16.13■□□□□ 0.17
SEC13-205ENST00000397101 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
SEC13-205ENST00000397101 CCDC85BQ15834 202 aaPredicted RBP16.13■□□□□ 0.17
SEC13-205ENST00000397101 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
SEC13-205ENST00000397101 NUP88Q99567 741 aaPredicted RBP16.13■□□□□ 0.17
SEC13-205ENST00000397101 Q9Y3F1 56 aa16.13■□□□□ 0.17
SEC13-205ENST00000397101 CTDP1Q9Y5B0 961 aaPredicted RBP16.13■□□□□ 0.17
SEC13-205ENST00000397101 TRANK1O15050 2925 aa16.12■□□□□ 0.17
SEC13-205ENST00000397101 IGKV6D-41A0A0C4DH26 115 aa16.12■□□□□ 0.17
SEC13-205ENST00000397101 ZEB2O60315 1214 aa16.12■□□□□ 0.17
SEC13-205ENST00000397101 EIF5BO60841 1220 aaKnown RBP16.12■□□□□ 0.17
SEC13-205ENST00000397101 PFKMP08237 780 aa16.12■□□□□ 0.17
SEC13-205ENST00000397101 RASA1P20936 1047 aa16.12■□□□□ 0.17
SEC13-205ENST00000397101 ITGA7Q13683 1181 aa16.12■□□□□ 0.17
SEC13-205ENST00000397101 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
SEC13-205ENST00000397101 FAM133AQ8N9E0 248 aa16.12■□□□□ 0.17
SEC13-205ENST00000397101 NOC4LQ9BVI4 516 aaKnown RBP16.12■□□□□ 0.17
SEC13-205ENST00000397101 SLC4A7Q9Y6M7 1214 aa16.12■□□□□ 0.17
SEC13-205ENST00000397101 ASB14A6NK59 587 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 TNFAIP2Q03169 654 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 PPP2R2DQ66LE6 453 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 OTOP2Q7RTS6 562 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 TICAM2Q86XR7 235 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 GMCL1P1Q8NEA9 526 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 APPBP2Q92624 585 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 FAM227BQ96M60 508 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 MKNK2Q9HBH9 465 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 RAVER2Q9HCJ3 691 aaKnown RBP16.11■□□□□ 0.17
SEC13-205ENST00000397101 HELLSQ9NRZ9 838 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 ASTN1O14525 1302 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 GRIN2DO15399 1336 aa16.11■□□□□ 0.17
SEC13-205ENST00000397101 FSCN1Q16658 493 aaKnown RBP16.1■□□□□ 0.17
SEC13-205ENST00000397101 C8orf34Q49A92 452 aa16.1■□□□□ 0.17
SEC13-205ENST00000397101 MCMDC2Q4G0Z9 681 aa16.1■□□□□ 0.17
SEC13-205ENST00000397101 CXCL17Q6UXB2 119 aa16.1■□□□□ 0.17
SEC13-205ENST00000397101 KIAA1211Q6ZU35 1233 aa16.1■□□□□ 0.17
SEC13-205ENST00000397101 TLK2Q86UE8 772 aa16.1■□□□□ 0.17
SEC13-205ENST00000397101 KIFC2Q96AC6 838 aa16.1■□□□□ 0.17
SEC13-205ENST00000397101 PUS7LQ9H0K6 701 aaKnown RBP16.1■□□□□ 0.17
SEC13-205ENST00000397101 WNT8AQ9H1J5 351 aa16.1■□□□□ 0.17
SEC13-205ENST00000397101 ACAD9Q9H845 621 aa16.1■□□□□ 0.17
SEC13-205ENST00000397101 ZNF287Q9HBT7 754 aa16.1■□□□□ 0.17
SEC13-205ENST00000397101 A0A0D9SFI3 127 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.09■□□□□ 0.17
SEC13-205ENST00000397101 CHGBP05060 677 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
SEC13-205ENST00000397101 BEX3Q00994 111 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 TKFCQ3LXA3 575 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 ZMYM1Q5SVZ6 1142 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 IQSEC1Q6DN90 963 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 VWCEQ96DN2 955 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 STRBPQ96SI9 672 aaKnown RBP16.09■□□□□ 0.17
SEC13-205ENST00000397101 SEC62Q99442 399 aaKnown RBP16.09■□□□□ 0.17
SEC13-205ENST00000397101 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 COG5Q9UP83 839 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 UMODL1Q5DID0 1318 aa16.09■□□□□ 0.17
SEC13-205ENST00000397101 MCM3APO60318 1980 aa16.08■□□□□ 0.16
SEC13-205ENST00000397101 B4GALT4O60513 344 aa16.08■□□□□ 0.16
SEC13-205ENST00000397101 TTLL1O95922 423 aa16.08■□□□□ 0.16
SEC13-205ENST00000397101 ATP2A2P16615 1042 aaKnown RBP16.08■□□□□ 0.16
SEC13-205ENST00000397101 CCL23P55773 120 aa16.08■□□□□ 0.16
SEC13-205ENST00000397101 AGBL1Q96MI9 1066 aa16.08■□□□□ 0.16
SEC13-205ENST00000397101 AP5M1Q9H0R1 490 aa16.08■□□□□ 0.16
SEC13-205ENST00000397101 ANO2Q9NQ90 1003 aa16.08■□□□□ 0.16
SEC13-205ENST00000397101 A1CFQ9NQ94 594 aaKnown RBP16.08■□□□□ 0.16
SEC13-205ENST00000397101 MTMR4Q9NYA4 1195 aa16.08■□□□□ 0.16
SEC13-205ENST00000397101 MTCH2Q9Y6C9 303 aa16.08■□□□□ 0.16
SEC13-205ENST00000397101 GSG1L2A8MUP6 293 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 M0R2C6 588 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 GTPBP6O43824 516 aaPredicted RBP16.07■□□□□ 0.16
SEC13-205ENST00000397101 PLA2G6O60733 806 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 REC8O95072 547 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 SUPT20HL2P0C7V6 817 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 BMP3P12645 472 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 SMPD1P17405 629 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 RABGGTBP53611 331 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 CNTN2Q02246 1040 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 TMEM67Q5HYA8 995 aa16.07■□□□□ 0.16
SEC13-205ENST00000397101 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms