RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 CTDP1Q9Y5B0 961 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-202ENST00000396629 COL4A4P53420 1690 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-202ENST00000396629 LCTP09848 1927 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 PTPRSQ13332 1948 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 XIRP2A4UGR9 3374 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 IGKV6D-41A0A0C4DH26 115 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 SOWAHBA6NEL2 793 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 CA3P07451 260 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 HLA-CQ95604 372 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 MKL1Q969V6 931 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 KIFC2Q96AC6 838 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 AP5M1Q9H0R1 490 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 SLC4A4Q9Y6R1 1079 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 TANC1Q9C0D5 1861 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 ASB14A6NK59 587 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 PI4K2BG5E9Z4 385 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 DYNC1LI2O43237 492 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-202ENST00000396629 FDX1P10109 184 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 SMPD1P17405 629 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 UBE3CQ15386 1083 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 SBK1Q52WX2 424 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 KRT40Q6A162 431 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 IQSEC1Q6DN90 963 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 NOL8Q76FK4 1167 aaKnown RBP10.11□□□□□ -0.79
SCFD1-202ENST00000396629 ITPRIPQ8IWB1 547 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 CLASRPQ8N2M8 674 aaKnown RBP10.11□□□□□ -0.79
SCFD1-202ENST00000396629 PHOSPHO2Q8TCD6 241 aa10.11□□□□□ -0.79
SCFD1-202ENST00000396629 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.11□□□□□ -0.793e-9■■□□□ 13.6
SCFD1-202ENST00000396629 ALDH8A1Q9H2A2 487 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-202ENST00000396629 ARPP21Q9UBL0 812 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-202ENST00000396629 CHGBP05060 677 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 RLBP1P12271 317 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 PTGS1P23219 599 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 PSMC6P62333 389 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 TAP1Q03518 808 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 TAPT1Q6NXT6 567 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 SLC9A7Q96T83 725 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 ACAD9Q9H845 621 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 CERS4Q9HA82 394 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 A1CFQ9NQ94 594 aaKnown RBP10.1□□□□□ -0.79
SCFD1-202ENST00000396629 CLIP2Q9UDT6 1046 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 SYNPO2Q9UMS6 1093 aa10.1□□□□□ -0.79
SCFD1-202ENST00000396629 ARHGEF15O94989 841 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 IFIT2P09913 472 aaKnown RBP10.09□□□□□ -0.79
SCFD1-202ENST00000396629 SUPT20HL2P0C7V6 817 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 ATP5JP18859 108 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 RFC2P35250 354 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 RPAP2Q8IXW5 612 aaPredicted RBP10.09□□□□□ -0.79
SCFD1-202ENST00000396629 FTSJ3Q8IY81 847 aaKnown RBP10.09□□□□□ -0.79
SCFD1-202ENST00000396629 KIF1BPQ96EK5 621 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 PDGFCQ9NRA1 345 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 SCN10AQ9Y5Y9 1956 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 ACTN1P12814 892 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 GRB10Q13322 594 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 TKFCQ3LXA3 575 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 TMEM63BQ5T3F8 832 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 DEFB128Q7Z7B8 93 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 GMCL1P1Q8NEA9 526 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 TET1Q8NFU7 2136 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 ARNTL2Q8WYA1 636 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 HAUS7Q99871 368 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 PUS7LQ9H0K6 701 aaKnown RBP10.09□□□□□ -0.79
SCFD1-202ENST00000396629 BOLA2Q9H3K6 86 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 MKNK2Q9HBH9 465 aa10.09□□□□□ -0.79
SCFD1-202ENST00000396629 ZNF536O15090 1300 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 TNKSO95271 1327 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 FAM86C2PA6NEL3 165 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 LPXNO60711 386 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 CYP2C9P11712 490 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 GIMAP6Q6P9H5 292 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 ALYREFQ86V81 257 aaKnown RBP10.08□□□□□ -0.8
SCFD1-202ENST00000396629 HERC6Q8IVU3 1022 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 MORC4Q8TE76 937 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 CD320Q9NPF0 282 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 HOMER2Q9NSB8 354 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 RNF146Q9NTX7 359 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 TRMT13Q9NUP7 481 aaKnown RBP10.08□□□□□ -0.8
SCFD1-202ENST00000396629 MTMR4Q9NYA4 1195 aa10.08□□□□□ -0.8
SCFD1-202ENST00000396629 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
SCFD1-202ENST00000396629 BMP3P12645 472 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 STRBPQ96SI9 672 aaKnown RBP10.07□□□□□ -0.8
SCFD1-202ENST00000396629 VTA1Q9NP79 307 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 POLR3EQ9NVU0 708 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 LMCD1Q9NZU5 365 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 COG6Q9Y2V7 657 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 DDX49Q9Y6V7 483 aaKnown RBP10.07□□□□□ -0.8
SCFD1-202ENST00000396629 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
SCFD1-202ENST00000396629 GSG1L2A8MUP6 293 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 PRR33A8MZF0 331 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 KIF28PB7ZC32 967 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 PURAQ00577 322 aaKnown RBP10.07□□□□□ -0.8
SCFD1-202ENST00000396629 DUSP28Q4G0W2 176 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 SLFN13Q68D06 897 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 ZSCAN25Q6NSZ9 544 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 FBXO16Q8IX29 292 aaPredicted RBP10.07□□□□□ -0.8
SCFD1-202ENST00000396629 CEP95Q96GE4 821 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 TRERF1Q96PN7 1200 aa10.07□□□□□ -0.8
SCFD1-202ENST00000396629 SIP14410 1827 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 TMEM232C9JQI7 657 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 PITPNM1O00562 1244 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms