RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CCPG1Q9ULG6 757 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 A0A0D9SFI3 127 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 PDIA3P30101 505 aaKnown RBP17.19■□□□□ 0.34
GNE-202ENST00000396594 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.19■□□□□ 0.34
GNE-202ENST00000396594 KLHDC4Q8TBB5 520 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
GNE-202ENST00000396594 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 PALLDQ8WX93 1383 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 MCM6Q14566 821 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 MAP3K21Q5TCX8 1036 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 ACCSQ96QU6 501 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 IFIH1Q9BYX4 1025 aaKnown RBP17.19■□□□□ 0.34
GNE-202ENST00000396594 DONSONQ9NYP3 566 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 SERTAD1Q9UHV2 236 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 IPO11Q9UI26 975 aaKnown RBP17.19■□□□□ 0.34
GNE-202ENST00000396594 SERPINB13Q9UIV8 391 aa17.19■□□□□ 0.34
GNE-202ENST00000396594 NOL3O60936 208 aaKnown RBP17.18■□□□□ 0.34
GNE-202ENST00000396594 MMP14P50281 582 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 TPH2Q8IWU9 490 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 UBLCP1Q8WVY7 318 aaPredicted RBP17.18■□□□□ 0.34
GNE-202ENST00000396594 FAM167AQ96KS9 214 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 TMX1Q9H3N1 280 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 GREM2Q9H772 168 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 TNNI1P19237 187 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 IRX4P78413 519 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 ANKRD35Q8N283 1001 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 BBS5Q8N3I7 341 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 TSC1Q92574 1164 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 MTMR6Q9Y217 621 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 RPN1P04843 607 aaKnown RBP17.18■□□□□ 0.34
GNE-202ENST00000396594 KRT10P13645 584 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 ARHGAP25P42331 645 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 USH1GQ495M9 461 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 TTC39CQ8N584 583 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 DDX23Q9BUQ8 820 aaKnown RBP17.18■□□□□ 0.34
GNE-202ENST00000396594 ZSWIM4Q9H7M6 989 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 HOMER3Q9NSC5 361 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 I3L4J1 428 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 CRCPO75575 148 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 XKR9Q5GH70 373 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 CPXCR1Q8N123 301 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 PHKBQ93100 1093 aa17.18■□□□□ 0.34
GNE-202ENST00000396594 PXDNLA1KZ92 1463 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 VPS52Q8N1B4 723 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 IFT81Q8WYA0 676 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 ZNF215Q9UL58 517 aaPredicted RBP17.17■□□□□ 0.34
GNE-202ENST00000396594 STAM2O75886 525 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 CAPN2P17655 700 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 RASSF2P50749 326 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 CUL4AQ13619 759 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 DPH6Q7L8W6 267 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 PAIP2Q9BPZ3 127 aaKnown RBP17.17■□□□□ 0.34
GNE-202ENST00000396594 MED7O43513 233 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 GYG1P46976 350 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 TMEM179Q6ZVK1 233 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 PCDHA1Q9Y5I3 950 aa17.17■□□□□ 0.34
GNE-202ENST00000396594 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 K7ENM7 598 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 ATP8B1O43520 1251 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 BMP3P12645 472 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 GSPT1P15170 499 aaKnown RBP17.16■□□□□ 0.34
GNE-202ENST00000396594 ARL1P40616 181 aaPredicted RBP17.16■□□□□ 0.34
GNE-202ENST00000396594 BCAMP50895 628 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 CCDC89Q8N998 374 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 SMC1BQ8NDV3 1235 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 CAPZA3Q96KX2 299 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
GNE-202ENST00000396594 PLIN2Q99541 437 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 AP5M1Q9H0R1 490 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 NARFQ9UHQ1 456 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 ALAS1P13196 640 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 SH3BGRP55822 239 aaPredicted RBP17.16■□□□□ 0.34
GNE-202ENST00000396594 SP4Q02446 784 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 ALX1Q15699 326 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 ALDH8A1Q9H2A2 487 aaPredicted RBP17.16■□□□□ 0.34
GNE-202ENST00000396594 CAMSAP1Q5T5Y3 1602 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 TLR3O15455 904 aaKnown RBP17.16■□□□□ 0.34
GNE-202ENST00000396594 PPFIA3O75145 1194 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 CD19P15391 556 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 GABPB1Q06547 395 aaPredicted RBP17.16■□□□□ 0.34
GNE-202ENST00000396594 MUM1L1Q5H9M0 696 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 RINT1Q6NUQ1 792 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 LSM14BQ9BX40 385 aaKnown RBP17.16■□□□□ 0.34
GNE-202ENST00000396594 TAB2Q9NYJ8 693 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 DIP2AQ14689 1571 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 MADDQ8WXG6 1647 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 JAK3P52333 1124 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 SH2D4BQ5SQS7 431 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
GNE-202ENST00000396594 PSMC2P35998 433 aaKnown RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 POLGP54098 1239 aaPredicted RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 APOA5Q6Q788 366 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 TCP11Q8WWU5 503 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 NACA2Q9H009 215 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 NBPF3Q9H094 633 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 ASIC3Q9UHC3 531 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms