RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 KLHL29Q96CT2 875 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 BATF3Q9NR55 127 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 INTUQ9ULD6 942 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 A0A087WZG4 1122 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 LRRIQ3A6PVS8 624 aaPredicted RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 SNRPA1P09661 255 aaKnown RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 VEGFAP15692 232 aaPredicted RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 CCT6AP40227 531 aaKnown RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 CKAP4Q07065 602 aaKnown RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.31□□□□□ -0.92
NDE1-202ENST00000396355 SPTY2D1Q68D10 685 aaPredicted RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 KCNV1Q6PIU1 500 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 TOGARAM2Q6ZUX3 1019 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 C2CD5Q86YS7 1000 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 SIX5Q8N196 739 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 FAM81AQ8TBF8 368 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 ARHGEF2Q92974 986 aaKnown RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 VCX3AQ9NNX9 186 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 BSDC1Q9NW68 430 aaPredicted RBP9.31□□□□□ -0.92
NDE1-202ENST00000396355 DLGAP2Q9P1A6 1054 aa9.31□□□□□ -0.92
NDE1-202ENST00000396355 SHANK3Q9BYB0 1731 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 AKR1B15C9JRZ8 316 aaPredicted RBP9.3□□□□□ -0.92
NDE1-202ENST00000396355 IGHMBP2P38935 993 aaKnown RBP9.3□□□□□ -0.92
NDE1-202ENST00000396355 ACCSLQ4AC99 568 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 ERFEQ4G0M1 354 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 Q4G0T1 1027 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 GRAMD4Q6IC98 578 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 CCDC43Q96MW1 224 aaKnown RBP9.3□□□□□ -0.92
NDE1-202ENST00000396355 ALDH8A1Q9H2A2 487 aaPredicted RBP9.3□□□□□ -0.92
NDE1-202ENST00000396355 L2HGDHQ9H9P8 463 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 PFDN4Q9NQP4 134 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 ZBTB21Q9ULJ3 1066 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.3□□□□□ -0.92
NDE1-202ENST00000396355 CUTAO60888 179 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 A1BGP04217 495 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 FOXO4P98177 505 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 MAP7Q14244 749 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 ATG9AQ7Z3C6 839 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 PPFIBP2Q8ND30 876 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 SMC1BQ8NDV3 1235 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 HAUS1Q96CS2 278 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 PGBD1Q96JS3 809 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 DDX23Q9BUQ8 820 aaKnown RBP9.3□□□□□ -0.92
NDE1-202ENST00000396355 ZNF232Q9UNY5 417 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 TSC22D4Q9Y3Q8 395 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 GBP1P32455 592 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 ITPK1Q13572 414 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 SPA17Q15506 151 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 CCDC57Q2TAC2 916 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 TTLL7Q6ZT98 887 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 VSIG1Q86XK7 387 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 HVCN1Q96D96 273 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 HAUS7Q99871 368 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 UBAC1Q9BSL1 405 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 NOD2Q9HC29 1040 aa9.3□□□□□ -0.92
NDE1-202ENST00000396355 KCPQ6ZWJ8 1503 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 SOWAHDA6NJG2 315 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 OPLAHO14841 1288 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 EIF3HO15372 352 aaKnown RBP eCLIP9.29□□□□□ -0.92
NDE1-202ENST00000396355 RPS6KA4O75676 772 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 YEATS4O95619 227 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 SYKP43405 635 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 CRKLP46109 303 aaKnown RBP9.29□□□□□ -0.92
NDE1-202ENST00000396355 MYL5Q02045 173 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 BEND6Q5SZJ8 279 aaPredicted RBP9.29□□□□□ -0.92
NDE1-202ENST00000396355 OTUD7BQ6GQQ9 843 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 LMBR1LQ6UX01 489 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 Q6ZUG5 572 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 SPATS2Q86XZ4 545 aaKnown RBP9.29□□□□□ -0.92
NDE1-202ENST00000396355 TTLL6Q8N841 843 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 UHMK1Q8TAS1 419 aaKnown RBP9.29□□□□□ -0.92
NDE1-202ENST00000396355 SCOCQ9UIL1 159 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 PAPPAQ13219 1627 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 SH2D4BQ5SQS7 431 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 SELENOOQ9BVL4 669 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 TRAIPQ9BWF2 469 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 TRIM31Q9BZY9 425 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.29□□□□□ -0.921e-8■□□□□ 10
NDE1-202ENST00000396355 HMG20BQ9P0W2 317 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 FAF1Q9UNN5 650 aaPredicted RBP9.29□□□□□ -0.92
NDE1-202ENST00000396355 GOLGA8KD6RF30 607 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 EEF2P13639 858 aaKnown RBP9.29□□□□□ -0.92
NDE1-202ENST00000396355 MTF1Q14872 753 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 ANKRD1Q15327 319 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 CFAP157Q5JU67 520 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 TMEM154Q6P9G4 183 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 DNAJC10Q8IXB1 793 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 CCDC65Q8IXS2 484 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 NEK1Q96PY6 1258 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 LZTS1Q9Y250 596 aa9.29□□□□□ -0.92
NDE1-202ENST00000396355 THSD7AQ9UPZ6 1657 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 HDLBPQ00341 1268 aaKnown RBP9.28□□□□□ -0.92
NDE1-202ENST00000396355 FKBP4Q02790 459 aaKnown RBP eCLIP9.28□□□□□ -0.92
NDE1-202ENST00000396355 SOGA3Q5TF21 947 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 C8orf74Q6P047 294 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 DAAM2Q86T65 1068 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 MAP7D3Q8IWC1 876 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 NOA1Q8NC60 698 aaKnown RBP9.28□□□□□ -0.92
NDE1-202ENST00000396355 FMNL1O95466 1100 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms