RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 GIMAP8Q8ND71 665 aaPredicted RBP17.95■□□□□ 0.46
CCHCR1-202ENST00000396263 NEK11Q8NG66 645 aa17.95■□□□□ 0.46
CCHCR1-202ENST00000396263 GRAPLQ8TC17 118 aaPredicted RBP17.95■□□□□ 0.46
CCHCR1-202ENST00000396263 SPZ1Q9BXG8 430 aa17.95■□□□□ 0.46
CCHCR1-202ENST00000396263 CUEDC2Q9H467 287 aa17.95■□□□□ 0.46
CCHCR1-202ENST00000396263 ARFGAP3Q9NP61 516 aa17.95■□□□□ 0.46
CCHCR1-202ENST00000396263 LGALS16A8MUM7 142 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 LDHCP07864 332 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 RASA1P20936 1047 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 ARHGAP25P42331 645 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 STIM1Q13586 685 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 DIXDC1Q155Q3 683 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 EZH2Q15910 746 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 C15orf52Q6ZUT6 534 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 TGFBRAP1Q8WUH2 860 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 AK8Q96MA6 479 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 ZMYND12Q9H0C1 365 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 NRXN2Q9P2S2 1712 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 CCDC151A5D8V7 595 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 TRIM49BA6NDI0 452 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 SASH3O75995 380 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 ST5P78524 1137 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 EN1Q05925 392 aaPredicted RBP17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 SLC35F6Q8N357 371 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 MB21D1Q8N884 522 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 SLC44A5Q8NCS7 719 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 RASSF8Q8NHQ8 419 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 ZNF507Q8TCN5 953 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 TSPYL1Q9H0U9 437 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 ZNF287Q9HBT7 754 aa17.94■□□□□ 0.46
CCHCR1-202ENST00000396263 DDX60LQ5H9U9 1706 aaKnown RBP17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 PMS1P54277 932 aaKnown RBP17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 BRD3Q15059 726 aa17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 GRIK5Q16478 980 aa17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 KIF4BQ2VIQ3 1234 aa17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 PAXIP1Q6ZW49 1069 aaPredicted RBP17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 ZNF804AQ7Z570 1209 aa17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 STX8Q9UNK0 236 aa17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 PSMA7O14818 248 aa17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 NOC3LQ8WTT2 800 aaKnown RBP17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 NAPGQ99747 312 aaPredicted RBP17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 RTFDC1Q9BY42 306 aaPredicted RBP17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 SNED1Q8TER0 1413 aa17.93■□□□□ 0.46
CCHCR1-202ENST00000396263 FLT1P17948 1338 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 POTEB2H3BUK9 544 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 CRY2Q49AN0 593 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 TTI2Q6NXR4 508 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 KRT25Q7Z3Z0 450 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 OR8K1Q8NGG5 319 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 ZBTB9Q96C00 473 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 DHTKD1Q96HY7 919 aaPredicted RBP17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 CAMKK2Q96RR4 588 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 DNAJC7Q99615 494 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 TTC26A0AVF1 554 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 KLRF2D3W0D1 207 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 LRRC15Q8TF66 581 aa17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 EPN1Q9Y6I3 576 aaPredicted RBP17.92■□□□□ 0.46
CCHCR1-202ENST00000396263 C16orf86Q6ZW13 317 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 MAPKAPK5Q8IW41 473 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 MSANTD4Q8NCY6 345 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 HNRNPLLQ8WVV9 542 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 TRIM47Q96LD4 638 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 SLF1Q9BQI6 1058 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 FUT8Q9BYC5 575 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 CAPN11Q9UMQ6 739 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 NDUFA10O95299 355 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 ABL1P00519 1130 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 OR52Z1P0C646 297 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 SMARCA1P28370 1054 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 IRX3P78415 501 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 WHAMMP3Q1A5X7 153 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 CABP7Q86V35 215 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 CHP1Q99653 195 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 ANKZF1Q9H8Y5 726 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 PUF60Q9UHX1 559 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 RAB21Q9UL25 225 aa17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 LUC7L2Q9Y383 392 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-202ENST00000396263 POLR3GO15318 223 aaPredicted RBP17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 DNM2P50570 870 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 NAPAP54920 295 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 NEDD1Q8NHV4 660 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 ZSWIM4Q9H7M6 989 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 MAGEC2Q9UBF1 373 aaPredicted RBP17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 SAP30BPQ9UHR5 308 aaKnown RBP17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 REXO2Q9Y3B8 237 aaKnown RBP17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 GOLGA8HP0CJ92 632 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 PLCG1P19174 1290 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 GNA11P29992 359 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 CDK8P49336 464 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 ORC2Q13416 577 aaPredicted RBP17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 NONOQ15233 471 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 MSL1Q68DK7 614 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 NLGN1Q8N2Q7 840 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 RPGRQ92834 1020 aaKnown RBP17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 ZFP91Q96JP5 570 aaPredicted RBP17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 EYA3Q99504 573 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 C6orf50Q9HD87 102 aa17.9■□□□□ 0.46
CCHCR1-202ENST00000396263 GPR75-ASB3A0A0A6YYF3 556 aa17.89■□□□□ 0.45
CCHCR1-202ENST00000396263 SRGNP10124 158 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms