RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 FDX1P10109 184 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 TRAPPC10P48553 1259 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 JAKMIP3Q5VZ66 844 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 PROCA1Q8NCQ7 364 aaPredicted RBP23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 SLC38A10Q9HBR0 1119 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 PCDHB6Q9Y5E3 794 aa23.35■■□□□ 1.33
VCPKMT-202ENST00000395860 GOLGA6L4A6NEF3 574 aa23.34■■□□□ 1.33
VCPKMT-202ENST00000395860 ZBED4O75132 1171 aa23.34■■□□□ 1.33
VCPKMT-202ENST00000395860 ICAM1P05362 532 aa23.34■■□□□ 1.33
VCPKMT-202ENST00000395860 TAL1P17542 331 aaPredicted RBP23.34■■□□□ 1.33
VCPKMT-202ENST00000395860 COG2Q14746 738 aa23.34■■□□□ 1.33
VCPKMT-202ENST00000395860 KCNG4Q8TDN1 519 aa23.34■■□□□ 1.33
VCPKMT-202ENST00000395860 TMEM260Q9NX78 707 aa23.34■■□□□ 1.33
VCPKMT-202ENST00000395860 SPTLC2O15270 562 aa23.33■■□□□ 1.33
VCPKMT-202ENST00000395860 DSG3P32926 999 aa23.33■■□□□ 1.33
VCPKMT-202ENST00000395860 SLC39A14Q15043 492 aa23.33■■□□□ 1.33
VCPKMT-202ENST00000395860 NONOQ15233 471 aaKnown RBP eCLIP23.33■■□□□ 1.33
VCPKMT-202ENST00000395860 UBE2SQ16763 222 aa23.33■■□□□ 1.33
VCPKMT-202ENST00000395860 TTC38Q5R3I4 469 aa23.33■■□□□ 1.33
VCPKMT-202ENST00000395860 ATG4CQ96DT6 458 aa23.33■■□□□ 1.33
VCPKMT-202ENST00000395860 CCPG1Q9ULG6 757 aa23.33■■□□□ 1.33
VCPKMT-202ENST00000395860 CEP131Q9UPN4 1083 aa23.33■■□□□ 1.33
VCPKMT-202ENST00000395860 ABCB11O95342 1321 aa23.33■■□□□ 1.32
VCPKMT-202ENST00000395860 VWA5AO00534 786 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 MBD3O95983 291 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 ME1P48163 572 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 INF2Q27J81 1249 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 TREML2Q5T2D2 321 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 CPXCR1Q8N123 301 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 MRPL11Q9Y3B7 192 aaKnown RBP23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 ZNF536O15090 1300 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 CLK2P49760 499 aaKnown RBP23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 PTPAQ15257 358 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 KLHL40Q2TBA0 621 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 GPT2Q8TD30 523 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 AGBL1Q96MI9 1066 aa23.32■■□□□ 1.32
VCPKMT-202ENST00000395860 GJA5P36382 358 aa23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 CST9Q5W186 159 aa23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 USP17L6PQ6QN14 398 aa23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 PGBD1Q96JS3 809 aa23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 RAVER2Q9HCJ3 691 aaKnown RBP23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 HOXC10Q9NYD6 342 aa23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 PNMA2Q9UL42 364 aa23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 MYPNQ86TC9 1320 aa23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 RBBP6Q7Z6E9 1792 aaKnown RBP23.31■■□□□ 1.32
VCPKMT-202ENST00000395860 ZNF174Q15697 407 aa23.3■■□□□ 1.32
VCPKMT-202ENST00000395860 FASTKD5Q7L8L6 764 aaKnown RBP23.3■■□□□ 1.32
VCPKMT-202ENST00000395860 JMYQ8N9B5 988 aa23.3■■□□□ 1.32
VCPKMT-202ENST00000395860 ADAMTS5Q9UNA0 930 aa23.3■■□□□ 1.32
VCPKMT-202ENST00000395860 MYH7BA7E2Y1 1941 aa23.3■■□□□ 1.32
VCPKMT-202ENST00000395860 PPP6R2O75170 966 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 MARCKSP29966 332 aaPredicted RBP23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 SNAPC2Q13487 334 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 WNK4Q96J92 1243 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 PCDHA7Q9UN72 937 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 WNT7AO00755 349 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 MEIS2O14770 477 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 OPLAHO14841 1288 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 BMP15O95972 392 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 HOXA7P31268 230 aaPredicted RBP23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 MCTP2Q6DN12 878 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 TBCKQ8TEA7 893 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 AGTPBP1Q9UPW5 1226 aa23.29■■□□□ 1.32
VCPKMT-202ENST00000395860 SPDYE16A6NNV3 312 aaPredicted RBP23.28■■□□□ 1.32
VCPKMT-202ENST00000395860 ALAS1P13196 640 aa23.28■■□□□ 1.32
VCPKMT-202ENST00000395860 AP3B2Q13367 1082 aa23.28■■□□□ 1.32
VCPKMT-202ENST00000395860 NEK8Q86SG6 692 aa23.28■■□□□ 1.32
VCPKMT-202ENST00000395860 MCM7P33993 719 aa23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 OAZ1P54368 228 aa23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 TEX2Q8IWB9 1127 aa23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 A0A0G2JMZ2 1700 aa23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 PIK3CDO00329 1044 aa23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 CFBP00751 764 aa23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 IRX3P78415 501 aaPredicted RBP23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 LETM2Q2VYF4 491 aa23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 ADALQ6DHV7 355 aa23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 REPS2Q8NFH8 660 aa23.27■■□□□ 1.32
VCPKMT-202ENST00000395860 SPDYE3A6NKU9 549 aa23.26■■□□□ 1.31
VCPKMT-202ENST00000395860 GCOM1H8Y6P7 765 aaPredicted RBP23.26■■□□□ 1.31
VCPKMT-202ENST00000395860 POLR2MP0CAP2 368 aa23.26■■□□□ 1.31
VCPKMT-202ENST00000395860 HUNKP57058 714 aa23.26■■□□□ 1.31
VCPKMT-202ENST00000395860 PABPC4Q13310 644 aaKnown RBP eCLIP23.26■■□□□ 1.31
VCPKMT-202ENST00000395860 MOGSQ13724 837 aa23.26■■□□□ 1.31
VCPKMT-202ENST00000395860 ANO3Q9BYT9 981 aa23.26■■□□□ 1.31
VCPKMT-202ENST00000395860 KIF3CO14782 793 aa23.25■■□□□ 1.31
VCPKMT-202ENST00000395860 FOSP01100 380 aaPredicted RBP23.25■■□□□ 1.31
VCPKMT-202ENST00000395860 HOXA13P31271 388 aaPredicted RBP23.25■■□□□ 1.31
VCPKMT-202ENST00000395860 GTF2A2P52657 109 aa23.25■■□□□ 1.31
VCPKMT-202ENST00000395860 MKRN3Q13064 507 aaKnown RBP23.25■■□□□ 1.31
VCPKMT-202ENST00000395860 HOMER2Q9NSB8 354 aa23.25■■□□□ 1.31
VCPKMT-202ENST00000395860 PASKQ96RG2 1323 aa23.25■■□□□ 1.31
VCPKMT-202ENST00000395860 CCNT1O60563 726 aaKnown RBP23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 PTGDRQ13258 359 aa23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 TMEM132BQ14DG7 1078 aa23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 SNRNP48Q6IEG0 339 aaKnown RBP23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 MCF2L2Q86YR7 1114 aa23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 KRI1Q8N9T8 703 aaKnown RBP23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 TBC1D5Q92609 795 aa23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 ZNF214Q9UL59 606 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms