RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MAGEB6P1A0A0J9YX57 407 aa16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 PITPNM1O00562 1244 aa16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 BAIAP3O94812 1187 aa16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 IQCF3P0C7M6 154 aa16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 ERVK-21P61565 698 aa16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 CNTN2Q02246 1040 aa16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 SLFN5Q08AF3 891 aa16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 PUS10Q3MIT2 529 aaKnown RBP16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 SDR42E1Q8WUS8 393 aa16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 KANSL2Q9H9L4 492 aa16.55■□□□□ 0.24
VCPKMT-201ENST00000395859 RIF1Q5UIP0 2472 aaKnown RBP16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 DYNC1LI2O43237 492 aaPredicted RBP16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 SUPT20HL2P0C7V6 817 aa16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 GPNMBQ14956 572 aa16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 TAPT1Q6NXT6 567 aa16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 MFSD14AQ96MC6 490 aa16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 CRNKL1Q9BZJ0 848 aaKnown RBP16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 SLC38A10Q9HBR0 1119 aa16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 PRKAG3Q9UGI9 489 aa16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 WDR87Q6ZQQ6 2873 aa16.54■□□□□ 0.24
VCPKMT-201ENST00000395859 TCRBV5S4A2TA0A5A2 114 aa16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 SOWAHBA6NEL2 793 aa16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 ZEB2O60315 1214 aa16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 CDK8P49336 464 aa16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 ANKRD35Q8N283 1001 aa16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 PRPF38AQ8NAV1 312 aaKnown RBP16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 CHST13Q8NET6 341 aa16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 NUP88Q99567 741 aaPredicted RBP16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 PDGFCQ9NRA1 345 aa16.53■□□□□ 0.24
VCPKMT-201ENST00000395859 GNAI2P04899 355 aa16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 WDR5P61964 334 aaKnown RBP16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 TCF15Q12870 199 aa16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 IER5LQ5T953 404 aa16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 C16orf86Q6ZW13 317 aa16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 BMP8AQ7Z5Y6 402 aa16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 TMCO2Q7Z6W1 182 aaPredicted RBP16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 AP5M1Q9H0R1 490 aa16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 FBXO40Q9UH90 709 aa16.52■□□□□ 0.24
VCPKMT-201ENST00000395859 BAZ2AQ9UIF9 1905 aaKnown RBP16.52■□□□□ 0.23
VCPKMT-201ENST00000395859 LINC01553A4QN01 128 aa16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 PDE6AP16499 860 aa16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 IRS1P35568 1242 aa16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 OAZ1P54368 228 aa16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 PTPN5P54829 565 aa16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 HERC4Q5GLZ8 1057 aaPredicted RBP16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 C12orf60Q5U649 245 aa16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 IQSEC1Q6DN90 963 aa16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 CPXCR1Q8N123 301 aa16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 ARHGAP45Q92619 1136 aa16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 TGS1Q96RS0 853 aaKnown RBP16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 CCDC8Q9H0W5 538 aaPredicted RBP16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 RAVER2Q9HCJ3 691 aaKnown RBP16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 NOP58Q9Y2X3 529 aaKnown RBP16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 DDX49Q9Y6V7 483 aaKnown RBP16.51■□□□□ 0.23
VCPKMT-201ENST00000395859 CYP2D7A0A087X1C5 515 aa16.5■□□□□ 0.23
VCPKMT-201ENST00000395859 H3BQ06 376 aaPredicted RBP16.5■□□□□ 0.23
VCPKMT-201ENST00000395859 GJB5O95377 273 aa16.5■□□□□ 0.23
VCPKMT-201ENST00000395859 DEFB103AP81534 67 aa16.5■□□□□ 0.23
VCPKMT-201ENST00000395859 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
VCPKMT-201ENST00000395859 ADHFE1Q8IWW8 467 aa16.5■□□□□ 0.23
VCPKMT-201ENST00000395859 LCTP09848 1927 aa16.5■□□□□ 0.23
VCPKMT-201ENST00000395859 TRIP12Q14669 1992 aaPredicted RBP16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 ASB14A6NK59 587 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 PRKAB2O43741 272 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 NDUFB10O96000 172 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 MORC4Q8TE76 937 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 CTAGE1Q96RT6 745 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 RAD9AQ99638 391 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 A1CFQ9NQ94 594 aaKnown RBP16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 MTUS1Q9ULD2 1270 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 FAM186AA6NE01 2351 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 DNAH14Q0VDD8 3507 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 MYO7AQ13402 2215 aa16.49■□□□□ 0.23
VCPKMT-201ENST00000395859 KMT2EQ8IZD2 1858 aa16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 F5H6K3 240 aa16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 ZBED4O75132 1171 aa16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 KLRC3Q07444 240 aa16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 TCTN1Q2MV58 587 aa16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 PABPC5Q96DU9 382 aaKnown RBP16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 ATP8A2Q9NTI2 1148 aa16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 POLR3EQ9NVU0 708 aa16.48■□□□□ 0.23
VCPKMT-201ENST00000395859 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 ZNF532Q9HCE3 1301 aa16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 GFRA3O60609 400 aa16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 KCNJ6P48051 423 aa16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 LRRFIP1Q32MZ4 808 aaKnown RBP16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 NBPF20Q3BBV1 942 aa16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 DUSP28Q4G0W2 176 aa16.47■□□□□ 0.23
VCPKMT-201ENST00000395859 NFRKBQ6P4R8 1299 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms