RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 GPR153Q6NV75 609 aa21.25■□□□□ 0.99
CXCL12-204ENST00000395793 DIAPH3Q9NSV4 1193 aa21.25■□□□□ 0.99
CXCL12-204ENST00000395793 CYP39A1Q9NYL5 469 aa21.25■□□□□ 0.99
CXCL12-204ENST00000395793 SNHG28P0DPA3 235 aa21.24■□□□□ 0.99
CXCL12-204ENST00000395793 PCP11498 1178 aaKnown RBP21.24■□□□□ 0.99
CXCL12-204ENST00000395793 MFAP1P55081 439 aaKnown RBP21.24■□□□□ 0.99
CXCL12-204ENST00000395793 GJA9P57773 515 aa21.24■□□□□ 0.99
CXCL12-204ENST00000395793 C9orf50Q5SZB4 431 aa21.24■□□□□ 0.99
CXCL12-204ENST00000395793 ZKSCAN3Q9BRR0 538 aa21.24■□□□□ 0.99
CXCL12-204ENST00000395793 MOXD2PA6NHM9 499 aa21.23■□□□□ 0.99
CXCL12-204ENST00000395793 NFIBO00712 420 aa21.23■□□□□ 0.99
CXCL12-204ENST00000395793 PQBP1O60828 265 aaKnown RBP21.23■□□□□ 0.99
CXCL12-204ENST00000395793 CLTBP09497 229 aa21.23■□□□□ 0.99
CXCL12-204ENST00000395793 C6orf222P0C671 652 aaPredicted RBP21.23■□□□□ 0.99
CXCL12-204ENST00000395793 ZNF543Q08ER8 600 aa21.23■□□□□ 0.99
CXCL12-204ENST00000395793 SHHQ15465 462 aa21.23■□□□□ 0.99
CXCL12-204ENST00000395793 NSMFQ6X4W1 530 aa21.23■□□□□ 0.99
CXCL12-204ENST00000395793 DEFB123Q8N688 67 aa21.23■□□□□ 0.99
CXCL12-204ENST00000395793 STARD7Q9NQZ5 370 aa21.23■□□□□ 0.99
CXCL12-204ENST00000395793 ASGR1P07306 291 aa21.22■□□□□ 0.99
CXCL12-204ENST00000395793 GSPT1P15170 499 aaKnown RBP21.22■□□□□ 0.99
CXCL12-204ENST00000395793 TMEM63BQ5T3F8 832 aa21.22■□□□□ 0.99
CXCL12-204ENST00000395793 TTC14Q96N46 770 aa21.22■□□□□ 0.99
CXCL12-204ENST00000395793 RNF41Q9H4P4 317 aaPredicted RBP21.22■□□□□ 0.99
CXCL12-204ENST00000395793 PDGFCQ9NRA1 345 aa21.22■□□□□ 0.99
CXCL12-204ENST00000395793 ASB14A6NK59 587 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 ZNF213O14771 459 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 KIAA0355O15063 1070 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 EPHB4P54760 987 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 NKX3-2P78367 333 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 BEX3Q00994 111 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 FAAP100Q0VG06 881 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 ANKRD33Q7Z3H0 272 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 CLEC4DQ8WXI8 215 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 ESR2Q92731 530 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 CPVLQ9H3G5 476 aa21.21■□□□□ 0.99
CXCL12-204ENST00000395793 GNEQ9Y223 722 aaKnown RBP21.21■□□□□ 0.99
CXCL12-204ENST00000395793 B4E1Z4 1266 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 KDM4AO75164 1064 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 IRX6P78412 446 aaPredicted RBP21.2■□□□□ 0.98
CXCL12-204ENST00000395793 TNFAIP2Q03169 654 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 BAATQ14032 418 aaPredicted RBP21.2■□□□□ 0.98
CXCL12-204ENST00000395793 TAPT1Q6NXT6 567 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 SLC30A10Q6XR72 485 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 EEPD1Q7L9B9 569 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 FBXO16Q8IX29 292 aaPredicted RBP21.2■□□□□ 0.98
CXCL12-204ENST00000395793 MORC4Q8TE76 937 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 NUP133Q8WUM0 1156 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 DSCC1Q9BVC3 393 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 MTMR10Q9NXD2 777 aa21.2■□□□□ 0.98
CXCL12-204ENST00000395793 HIP1O00291 1037 aa21.19■□□□□ 0.98
CXCL12-204ENST00000395793 GOLGA8HP0CJ92 632 aa21.19■□□□□ 0.98
CXCL12-204ENST00000395793 SMPD1P17405 629 aa21.19■□□□□ 0.98
CXCL12-204ENST00000395793 CDK7P50613 346 aa21.19■□□□□ 0.98
CXCL12-204ENST00000395793 PCSK9Q8NBP7 692 aaKnown RBP21.19■□□□□ 0.98
CXCL12-204ENST00000395793 TOX2Q96NM4 488 aa21.19■□□□□ 0.98
CXCL12-204ENST00000395793 ELP1O95163 1332 aa21.19■□□□□ 0.98
CXCL12-204ENST00000395793 MYH6P13533 1939 aa21.19■□□□□ 0.98
CXCL12-204ENST00000395793 COL6A3P12111 3177 aa21.18■□□□□ 0.98
CXCL12-204ENST00000395793 GNASQ5JWF2 1037 aa21.18■□□□□ 0.98
CXCL12-204ENST00000395793 TTC22Q5TAA0 569 aa21.18■□□□□ 0.98
CXCL12-204ENST00000395793 GLT1D1Q96MS3 346 aa21.18■□□□□ 0.98
CXCL12-204ENST00000395793 SPC25Q9HBM1 224 aa21.18■□□□□ 0.98
CXCL12-204ENST00000395793 TMEM39AQ9NV64 488 aa21.18■□□□□ 0.98
CXCL12-204ENST00000395793 TBX21Q9UL17 535 aa21.18■□□□□ 0.98
CXCL12-204ENST00000395793 LAMA2P24043 3122 aaKnown RBP21.17■□□□□ 0.98
CXCL12-204ENST00000395793 RAG1P15918 1043 aa21.17■□□□□ 0.98
CXCL12-204ENST00000395793 ALDH5A1P51649 535 aaPredicted RBP21.17■□□□□ 0.98
CXCL12-204ENST00000395793 TLK2Q86UE8 772 aa21.17■□□□□ 0.98
CXCL12-204ENST00000395793 DGKHQ86XP1 1220 aa21.17■□□□□ 0.98
CXCL12-204ENST00000395793 WDR19Q8NEZ3 1342 aa21.17■□□□□ 0.98
CXCL12-204ENST00000395793 PTPDC1A2A3K4 754 aa21.16■□□□□ 0.98
CXCL12-204ENST00000395793 DCDC2CA8MYV0 355 aa21.16■□□□□ 0.98
CXCL12-204ENST00000395793 CXCL17Q6UXB2 119 aa21.16■□□□□ 0.98
CXCL12-204ENST00000395793 NOL8Q76FK4 1167 aaKnown RBP21.16■□□□□ 0.98
CXCL12-204ENST00000395793 ENAHQ8N8S7 591 aaPredicted RBP21.16■□□□□ 0.98
CXCL12-204ENST00000395793 PNMA1Q8ND90 353 aa21.16■□□□□ 0.98
CXCL12-204ENST00000395793 ANKS1AQ92625 1134 aa21.16■□□□□ 0.98
CXCL12-204ENST00000395793 ZSCAN10Q96SZ4 725 aaPredicted RBP21.16■□□□□ 0.98
CXCL12-204ENST00000395793 UBA5Q9GZZ9 404 aa21.16■□□□□ 0.98
CXCL12-204ENST00000395793 ZSWIM5Q9P217 1185 aa21.16■□□□□ 0.98
CXCL12-204ENST00000395793 A0A0U1RQG5 324 aaPredicted RBP21.15■□□□□ 0.98
CXCL12-204ENST00000395793 ARVCFO00192 962 aa21.15■□□□□ 0.98
CXCL12-204ENST00000395793 FAM126BQ8IXS8 530 aa21.15■□□□□ 0.98
CXCL12-204ENST00000395793 VTA1Q9NP79 307 aa21.15■□□□□ 0.98
CXCL12-204ENST00000395793 GRIN2DO15399 1336 aa21.14■□□□□ 0.97
CXCL12-204ENST00000395793 TNKSO95271 1327 aa21.14■□□□□ 0.97
CXCL12-204ENST00000395793 DYNC1LI2O43237 492 aaPredicted RBP21.14■□□□□ 0.97
CXCL12-204ENST00000395793 CALML3P27482 149 aa21.14■□□□□ 0.97
CXCL12-204ENST00000395793 RPS6P62753 249 aaKnown RBP21.14■□□□□ 0.97
CXCL12-204ENST00000395793 FSCN1Q16658 493 aaKnown RBP21.14■□□□□ 0.97
CXCL12-204ENST00000395793 IMMTQ16891 758 aaKnown RBP21.14■□□□□ 0.97
CXCL12-204ENST00000395793 GPATCH4Q5T3I0 446 aaKnown RBP21.14■□□□□ 0.97
CXCL12-204ENST00000395793 IQSEC1Q6DN90 963 aa21.14■□□□□ 0.97
CXCL12-204ENST00000395793 FAM109BQ6ICB4 259 aaPredicted RBP21.14■□□□□ 0.97
CXCL12-204ENST00000395793 RNF207Q6ZRF8 634 aa21.14■□□□□ 0.97
CXCL12-204ENST00000395793 IQCA1Q86XH1 822 aa21.14■□□□□ 0.97
CXCL12-204ENST00000395793 VTI1AQ96AJ9 217 aa21.14■□□□□ 0.97
CXCL12-204ENST00000395793 GUCD1Q96NT3 240 aa21.14■□□□□ 0.97
CXCL12-204ENST00000395793 ADD3Q9UEY8 706 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms