RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 WDR46O15213 610 aaKnown RBP17.28■□□□□ 0.36
SCAF11-204ENST00000395454 CETPP11597 493 aa17.28■□□□□ 0.36
SCAF11-204ENST00000395454 TREML2Q5T2D2 321 aa17.28■□□□□ 0.36
SCAF11-204ENST00000395454 FASTKD5Q7L8L6 764 aaKnown RBP17.28■□□□□ 0.36
SCAF11-204ENST00000395454 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
SCAF11-204ENST00000395454 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
SCAF11-204ENST00000395454 CAPNS2Q96L46 248 aa17.28■□□□□ 0.36
SCAF11-204ENST00000395454 SPZ1Q9BXG8 430 aa17.28■□□□□ 0.36
SCAF11-204ENST00000395454 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
SCAF11-204ENST00000395454 CUTAO60888 179 aa17.27■□□□□ 0.36
SCAF11-204ENST00000395454 NDUFA8P51970 172 aa17.27■□□□□ 0.36
SCAF11-204ENST00000395454 ZNF543Q08ER8 600 aa17.27■□□□□ 0.36
SCAF11-204ENST00000395454 IKQ13123 557 aaPredicted RBP17.27■□□□□ 0.36
SCAF11-204ENST00000395454 SLC35G1Q2M3R5 365 aa17.27■□□□□ 0.36
SCAF11-204ENST00000395454 ASPRV1Q53RT3 343 aa17.27■□□□□ 0.36
SCAF11-204ENST00000395454 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
SCAF11-204ENST00000395454 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.36
SCAF11-204ENST00000395454 TIGD1Q96MW7 591 aa17.27■□□□□ 0.36
SCAF11-204ENST00000395454 GPCPD1Q9NPB8 672 aa17.27■□□□□ 0.36
SCAF11-204ENST00000395454 TMEM232C9JQI7 657 aa17.27■□□□□ 0.35
SCAF11-204ENST00000395454 HSPA6P17066 643 aa17.27■□□□□ 0.35
SCAF11-204ENST00000395454 HS1BP3Q53T59 392 aa17.27■□□□□ 0.35
SCAF11-204ENST00000395454 GPATCH4Q5T3I0 446 aaKnown RBP17.27■□□□□ 0.35
SCAF11-204ENST00000395454 RESP18Q5W5W9 173 aa17.27■□□□□ 0.35
SCAF11-204ENST00000395454 CKAP2LQ8IYA6 745 aa17.27■□□□□ 0.35
SCAF11-204ENST00000395454 BRI3BPQ8WY22 251 aa17.27■□□□□ 0.35
SCAF11-204ENST00000395454 LOC285556D6RIA3 1793 aa17.27■□□□□ 0.35
SCAF11-204ENST00000395454 A0A1B0GVL5 298 aa17.26■□□□□ 0.35
SCAF11-204ENST00000395454 MANSC4A6NHS7 340 aaPredicted RBP17.26■□□□□ 0.35
SCAF11-204ENST00000395454 PTPREP23469 700 aa17.26■□□□□ 0.35
SCAF11-204ENST00000395454 STAT2P52630 851 aa17.26■□□□□ 0.35
SCAF11-204ENST00000395454 MOGSQ13724 837 aa17.26■□□□□ 0.35
SCAF11-204ENST00000395454 SHC4Q6S5L8 630 aa17.26■□□□□ 0.35
SCAF11-204ENST00000395454 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
SCAF11-204ENST00000395454 BRMS1Q9HCU9 246 aa17.26■□□□□ 0.35
SCAF11-204ENST00000395454 AGTPBP1Q9UPW5 1226 aa17.26■□□□□ 0.35
SCAF11-204ENST00000395454 KLRF2D3W0D1 207 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 CYTH3O43739 400 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 FLOT1O75955 427 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 PFKFB1P16118 471 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 TRAPPC10P48553 1259 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 NOGQ13253 232 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 TTBK2Q6IQ55 1244 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 ZIC5Q96T25 663 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 UBA5Q9GZZ9 404 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 CPVLQ9H3G5 476 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 FBXO2Q9UK22 296 aaPredicted RBP17.25■□□□□ 0.35
SCAF11-204ENST00000395454 CEP131Q9UPN4 1083 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 hCG_1642624A0A1W2PR95 340 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 AOC2O75106 756 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 BMP15O95972 392 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 CALML3P27482 149 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 MARCKSP29966 332 aaPredicted RBP17.25■□□□□ 0.35
SCAF11-204ENST00000395454 SLC16A2P36021 539 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 ELOA2Q8IYF1 753 aaPredicted RBP17.25■□□□□ 0.35
SCAF11-204ENST00000395454 KRI1Q8N9T8 703 aaKnown RBP17.25■□□□□ 0.35
SCAF11-204ENST00000395454 DAGLBQ8NCG7 672 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 FBXO28Q9NVF7 368 aa17.25■□□□□ 0.35
SCAF11-204ENST00000395454 USP17L15C9J2P7 530 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 BTBD19C9JJ37 291 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 USP17L13C9JLJ4 530 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 USP17L11C9JVI0 530 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 USP17L18D6R9N7 530 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 USP17L22D6RA61 530 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 USP17L17D6RBQ6 530 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 USP17L19D6RCP7 530 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 USP17L20D6RJB6 530 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 USP17L24Q0WX57 530 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 GALNT17Q6IS24 598 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 SASS6Q6UVJ0 657 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 PTPN18Q99952 460 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 PCDHB6Q9Y5E3 794 aa17.24■□□□□ 0.35
SCAF11-204ENST00000395454 M0R2N6 131 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 ZNF202O95125 648 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 VEGFBP49765 207 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 IRX3P78415 501 aaPredicted RBP17.23■□□□□ 0.35
SCAF11-204ENST00000395454 SREBF2Q12772 1141 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 EARS2Q5JPH6 523 aaKnown RBP17.23■□□□□ 0.35
SCAF11-204ENST00000395454 GPAT2Q6NUI2 795 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 CATSPERGQ6ZRH7 1159 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 KIFC2Q96AC6 838 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 FEM1BQ9UK73 627 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 PDHXO00330 501 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 INHBEP58166 350 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 PABPC4Q13310 644 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCAF11-204ENST00000395454 ANO6Q4KMQ2 910 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 CHURC1Q8WUH1 139 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 BARHL2Q9NY43 387 aa17.23■□□□□ 0.35
SCAF11-204ENST00000395454 SRPRBQ9Y5M8 271 aaKnown RBP17.23■□□□□ 0.35
SCAF11-204ENST00000395454 TESPA1A2RU30 521 aaPredicted RBP17.22■□□□□ 0.35
SCAF11-204ENST00000395454 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
SCAF11-204ENST00000395454 STX1AQ16623 288 aa17.22■□□□□ 0.35
SCAF11-204ENST00000395454 FAM160B2Q86V87 743 aa17.22■□□□□ 0.35
SCAF11-204ENST00000395454 SLF1Q9BQI6 1058 aa17.22■□□□□ 0.35
SCAF11-204ENST00000395454 NOL7Q9UMY1 257 aaKnown RBP17.22■□□□□ 0.35
SCAF11-204ENST00000395454 FAM205CA6NFA0 338 aa17.21■□□□□ 0.35
SCAF11-204ENST00000395454 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCAF11-204ENST00000395454 COG2Q14746 738 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms