RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 NMT2O60551 498 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 TAL1P17542 331 aaPredicted RBP16■□□□□ 0.15
SCAF11-203ENST00000395453 MCCP23508 829 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 STAT2P52630 851 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 FAAP100Q0VG06 881 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 RCSD1Q6JBY9 416 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 FAM160B2Q86V87 743 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 CHST13Q8NET6 341 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 IL27Q8NEV9 243 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 STAG1Q8WVM7 1258 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 UHRF1Q96T88 793 aaPredicted RBP16■□□□□ 0.15
SCAF11-203ENST00000395453 TSEN34Q9BSV6 310 aaKnown RBP16■□□□□ 0.15
SCAF11-203ENST00000395453 FBXO40Q9UH90 709 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 STX8Q9UNK0 236 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 CTDP1Q9Y5B0 961 aaPredicted RBP16■□□□□ 0.15
SCAF11-203ENST00000395453 SYNGAP1Q96PV0 1343 aa16■□□□□ 0.15
SCAF11-203ENST00000395453 RANBP6O60518 1105 aaKnown RBP15.99■□□□□ 0.15
SCAF11-203ENST00000395453 SNAI1O95863 264 aaPredicted RBP15.99■□□□□ 0.15
SCAF11-203ENST00000395453 TIMP1P01033 207 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 SDSP20132 328 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 SLC1A4P43007 532 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 ZNF467Q7Z7K2 595 aaPredicted RBP15.99■□□□□ 0.15
SCAF11-203ENST00000395453 NUP133Q8WUM0 1156 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 RILPL2Q969X0 211 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 DDX11Q96FC9 970 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.99■□□□□ 0.156e-7■□□□□ 11.3
SCAF11-203ENST00000395453 STARD7Q9NQZ5 370 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 TCP11L1Q9NUJ3 509 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 ZNF536O15090 1300 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 CCDC171Q6TFL3 1326 aa15.99■□□□□ 0.15
SCAF11-203ENST00000395453 AKR1A1P14550 325 aa15.98■□□□□ 0.15
SCAF11-203ENST00000395453 PPIGQ13427 754 aaKnown RBP eCLIP15.98■□□□□ 0.155e-9■■■□□ 18.1
SCAF11-203ENST00000395453 MFSD5Q6N075 450 aa15.98■□□□□ 0.15
SCAF11-203ENST00000395453 FGD4Q96M96 766 aa15.98■□□□□ 0.15
SCAF11-203ENST00000395453 PBX4Q9BYU1 374 aa15.98■□□□□ 0.15
SCAF11-203ENST00000395453 PRDM12Q9H4Q4 367 aa15.98■□□□□ 0.15
SCAF11-203ENST00000395453 SLC4A3P48751 1232 aa15.97■□□□□ 0.15
SCAF11-203ENST00000395453 ACLYP53396 1101 aa15.97■□□□□ 0.15
SCAF11-203ENST00000395453 KCTD1Q719H9 257 aa15.97■□□□□ 0.15
SCAF11-203ENST00000395453 ANKRD35Q8N283 1001 aa15.97■□□□□ 0.15
SCAF11-203ENST00000395453 CNPY2Q9Y2B0 182 aa15.97■□□□□ 0.15
SCAF11-203ENST00000395453 CHD9Q3L8U1 2897 aa15.97■□□□□ 0.15
SCAF11-203ENST00000395453 MOXD2PA6NHM9 499 aa15.96■□□□□ 0.15
SCAF11-203ENST00000395453 ADAMTS4O75173 837 aa15.96■□□□□ 0.15
SCAF11-203ENST00000395453 PCP11498 1178 aaKnown RBP15.96■□□□□ 0.15
SCAF11-203ENST00000395453 PBX2P40425 430 aa15.96■□□□□ 0.15
SCAF11-203ENST00000395453 MFAP1P55081 439 aaKnown RBP15.96■□□□□ 0.15
SCAF11-203ENST00000395453 TMEM240Q5SV17 173 aa15.96■□□□□ 0.15
SCAF11-203ENST00000395453 AGBL1Q96MI9 1066 aa15.96■□□□□ 0.15
SCAF11-203ENST00000395453 TBX21Q9UL17 535 aa15.96■□□□□ 0.15
SCAF11-203ENST00000395453 PRR12Q9ULL5 1215 aa15.96■□□□□ 0.15
SCAF11-203ENST00000395453 SUPT16HQ9Y5B9 1047 aaKnown RBP15.96■□□□□ 0.15
SCAF11-203ENST00000395453 MROH7Q68CQ1 1323 aa15.96■□□□□ 0.15
SCAF11-203ENST00000395453 TOP1P11387 765 aaKnown RBP15.95■□□□□ 0.14
SCAF11-203ENST00000395453 CCDC85BQ15834 202 aaPredicted RBP15.95■□□□□ 0.14
SCAF11-203ENST00000395453 TKFCQ3LXA3 575 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 RASIP1Q5U651 963 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 BTNL9Q6UXG8 535 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 RASGRP2Q7LDG7 609 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 FAM133AQ8N9E0 248 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 DCAF4Q8WV16 495 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 TTC14Q96N46 770 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 TMEM47Q9BQJ4 181 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 C1QTNF1Q9BXJ1 281 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 TSPYL2Q9H2G4 693 aaPredicted RBP15.95■□□□□ 0.14
SCAF11-203ENST00000395453 ACAD9Q9H845 621 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 MSRAQ9UJ68 235 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 FAM184BQ9ULE4 1060 aa15.95■□□□□ 0.14
SCAF11-203ENST00000395453 GRXCR1A8MXD5 290 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 IGFBP4P22692 258 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 HAND2P61296 217 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 CNTN2Q02246 1040 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 IKQ13123 557 aaPredicted RBP15.94■□□□□ 0.14
SCAF11-203ENST00000395453 ACVR2BQ13705 512 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 ADGRE1Q14246 886 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 RAB30Q15771 203 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 RRP12Q5JTH9 1297 aaKnown RBP15.94■□□□□ 0.14
SCAF11-203ENST00000395453 PSRC1Q6PGN9 363 aaPredicted RBP15.94■□□□□ 0.14
SCAF11-203ENST00000395453 MFSD6Q6ZSS7 791 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 C16orf59Q7L2K0 433 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 TMEM199Q8N511 208 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 KLHDC9Q8NEP7 349 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 LENG1Q96BZ8 264 aaPredicted RBP15.94■□□□□ 0.14
SCAF11-203ENST00000395453 CHMP4CQ96CF2 233 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 TRERF1Q96PN7 1200 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 ABHD16BQ9H3Z7 469 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 TOMM22Q9NS69 142 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 HOMER2Q9NSB8 354 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.94■□□□□ 0.14
SCAF11-203ENST00000395453 MCM3APO60318 1980 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 ELP1O95163 1332 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 SYNRGQ9UMZ2 1314 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 HIP1O00291 1037 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 DUSP11O75319 330 aaKnown RBP15.94■□□□□ 0.14
SCAF11-203ENST00000395453 KCNA10Q16322 511 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 TTBK2Q6IQ55 1244 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 CWC27Q6UX04 472 aaKnown RBP15.94■□□□□ 0.14
SCAF11-203ENST00000395453 TBC1D10CQ8IV04 446 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 GLT1D1Q96MS3 346 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 KATNBL1Q9H079 304 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms