RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 UBE2SQ16763 222 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 INF2Q27J81 1249 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 TTC38Q5R3I4 469 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 GADL1Q6ZQY3 521 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 CPXCR1Q8N123 301 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 PGBD1Q96JS3 809 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 GBA2Q9HCG7 927 aaPredicted RBP11.29□□□□□ -0.6
BBS4-202ENST00000395205 BAZ2BQ9UIF8 2168 aaKnown RBP11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L15C9J2P7 530 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L13C9JLJ4 530 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L11C9JVI0 530 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L18D6R9N7 530 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L22D6RA61 530 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L17D6RBQ6 530 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L19D6RCP7 530 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L20D6RJB6 530 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 CXCL11O14625 94 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 TRAPPC10P48553 1259 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L24Q0WX57 530 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 COG2Q14746 738 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 CATSPERGQ6ZRH7 1159 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 JMYQ8N9B5 988 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 NAP1L5Q96NT1 182 aaPredicted RBP11.28□□□□□ -0.6
BBS4-202ENST00000395205 PCDHA7Q9UN72 937 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 MRPL11Q9Y3B7 192 aaKnown RBP11.28□□□□□ -0.6
BBS4-202ENST00000395205 POLR2AP24928 1970 aaKnown RBP11.28□□□□□ -0.6
BBS4-202ENST00000395205 MCM7P33993 719 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 FKBP1BP68106 108 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 PPIL2Q13356 520 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 PTPAQ15257 358 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 AGBL1Q96MI9 1066 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
BBS4-202ENST00000395205 HOXC10Q9NYD6 342 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 CCPG1Q9ULG6 757 aa11.28□□□□□ -0.6
BBS4-202ENST00000395205 PPP6R2O75170 966 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 ICAM1P05362 532 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 FDX1P10109 184 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 DSG3P32926 999 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 CAVIN1Q6NZI2 390 aaKnown RBP11.27□□□□□ -0.61
BBS4-202ENST00000395205 TBCKQ8TEA7 893 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 ATG4CQ96DT6 458 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 SLC38A10Q9HBR0 1119 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.61
BBS4-202ENST00000395205 UNCXA6NJT0 531 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 VWA5AO00534 786 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 BMP15O95972 392 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 LETM2Q2VYF4 491 aa11.27□□□□□ -0.61
BBS4-202ENST00000395205 CCAR1Q8IX12 1150 aaKnown RBP11.27□□□□□ -0.61
BBS4-202ENST00000395205 ABCB11O95342 1321 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 WNT7AO00755 349 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 CFBP00751 764 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 CLK2P49760 499 aaKnown RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 TREML2Q5T2D2 321 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 ADALQ6DHV7 355 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 GPBP1L1Q9HC44 474 aaPredicted RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 DOCK1Q14185 1865 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 ZNF536O15090 1300 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 MEIS2O14770 477 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 CCNT1O60563 726 aaKnown RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 ITGBL1O95965 494 aaPredicted RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 ALAS1P13196 640 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 PTGDRQ13258 359 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 HSP90AA2PQ14568 343 aaPredicted RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 FASTKD5Q7L8L6 764 aaKnown RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
BBS4-202ENST00000395205 GRPEL1Q9HAV7 217 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 PNMA2Q9UL42 364 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 KCNH4Q9UQ05 1017 aa11.26□□□□□ -0.61
BBS4-202ENST00000395205 SPDYE3A6NKU9 549 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 GCOM1H8Y6P7 765 aaPredicted RBP11.25□□□□□ -0.61
BBS4-202ENST00000395205 POLR2MP0CAP2 368 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 HOXA13P31271 388 aaPredicted RBP11.25□□□□□ -0.61
BBS4-202ENST00000395205 SNAPC2Q13487 334 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 MCTP2Q6DN12 878 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 SYAP1Q96A49 352 aaPredicted RBP11.25□□□□□ -0.61
BBS4-202ENST00000395205 CLIC6Q96NY7 704 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 MRVI1Q9Y6F6 885 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 ATAD5Q96QE3 1844 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 CUTAO60888 179 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 LIG1P18858 919 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 GJA5P36382 358 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 IRX3P78415 501 aaPredicted RBP11.25□□□□□ -0.61
BBS4-202ENST00000395205 MKRN3Q13064 507 aaKnown RBP11.25□□□□□ -0.61
BBS4-202ENST00000395205 CST9Q5W186 159 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 CCDC73Q6ZRK6 1079 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 FCHSD1Q86WN1 690 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 FSIP1Q8NA03 581 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 TBC1D5Q92609 795 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 WNK4Q96J92 1243 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 HOMER2Q9NSB8 354 aa11.25□□□□□ -0.61
BBS4-202ENST00000395205 A0A1W2PQ27 194 aa11.24□□□□□ -0.61
BBS4-202ENST00000395205 A0A1W2PQ64 194 aa11.24□□□□□ -0.61
BBS4-202ENST00000395205 A0A1W2PQD8 194 aa11.24□□□□□ -0.61
BBS4-202ENST00000395205 OPLAHO14841 1288 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms