RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 RNF8O76064 485 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 TUBB4AP04350 444 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 HDLBPQ00341 1268 aaKnown RBP13.37□□□□□ -0.27
SIN3A-202ENST00000394947 EHHADHQ08426 723 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 RINT1Q6NUQ1 792 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 ZNF449Q6P9G9 518 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 ZBTB33Q86T24 672 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 KITP10721 976 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 IL2RBP14784 551 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 TCIRG1Q13488 830 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
SIN3A-202ENST00000394947 DNAAF3Q8N9W5 541 aa13.37□□□□□ -0.27
SIN3A-202ENST00000394947 CDK13Q14004 1512 aaKnown RBP13.37□□□□□ -0.27
SIN3A-202ENST00000394947 TNNI3KQ59H18 835 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 SEPT9Q9UHD8 586 aaPredicted RBP13.36□□□□□ -0.27
SIN3A-202ENST00000394947 ANGEL1Q9UNK9 670 aaKnown RBP13.36□□□□□ -0.27
SIN3A-202ENST00000394947 FPGT-TNNI3KV9GXZ4 949 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 GTPBP10A4D1E9 387 aaKnown RBP13.36□□□□□ -0.27
SIN3A-202ENST00000394947 LRRD1A4D1F6 860 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 RAP1GDS1P52306 607 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 SDR42E1Q8WUS8 393 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 A0A087WWV3 80 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 NR1I2O75469 434 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 ZAP70P43403 619 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 POLGP54098 1239 aaPredicted RBP13.36□□□□□ -0.27
SIN3A-202ENST00000394947 AP1ARQ63HQ0 302 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 RAB44Q7Z6P3 723 aaPredicted RBP13.36□□□□□ -0.27
SIN3A-202ENST00000394947 MAML1Q92585 1016 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 POLIQ9UNA4 740 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 PI4K2BG5E9Z4 385 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 LRRN2O75325 713 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 TMTC3Q6ZXV5 915 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 ZFYVE19Q96K21 471 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 USP28Q96RU2 1077 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 CCNL1Q9UK58 526 aaPredicted RBP13.36□□□□□ -0.27
SIN3A-202ENST00000394947 FAN1Q9Y2M0 1017 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 NPHP3Q7Z494 1330 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 ARHGDIAP52565 204 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 C1orf112Q9NSG2 853 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 FAM8A1Q9UBU6 413 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 RAD50Q92878 1312 aa13.36□□□□□ -0.27
SIN3A-202ENST00000394947 PPFIA4O75335 1185 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ANKRD20A4Q4UJ75 823 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ANKRD20A8PQ5CZ79 823 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ANKRD20A2Q5SQ80 823 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ANKRD20A1Q5TYW2 823 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 KRT40Q6A162 431 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 USP40Q9NVE5 1235 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 EVI5O60447 810 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 MARCH10Q8NA82 808 aaPredicted RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 TTC41PQ6P2S7 1318 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 KIF19Q2TAC6 998 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 TCP11X2Q5H9J9 407 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 FAM186BQ8IYM0 893 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 SPICE1Q8N0Z3 855 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 CEP70Q8NHQ1 597 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 GJA10Q969M2 543 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 IPO11Q9UI26 975 aaKnown RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 TMEM191BP0C7N4 346 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 STX1BP61266 288 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 GTF2IP78347 998 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 POLR3CQ9BUI4 534 aaPredicted RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 BTG4Q9NY30 223 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ARHGEF11O15085 1522 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 MOCS3O95396 460 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 OCM2P0CE71 109 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 OCMP0CE72 109 aaPredicted RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 HADHAP40939 763 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 GRK7Q8WTQ7 553 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 CHAMP1Q96JM3 812 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ARHGAP6O43182 974 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 WBP4O75554 376 aaKnown RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 CAPRIN1Q14444 709 aaKnown RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 RSRC2Q7L4I2 434 aaKnown RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 HACE1Q8IYU2 909 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 FBXL13Q8NEE6 735 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 ZNF277Q9NRM2 450 aaPredicted RBP13.35□□□□□ -0.27
SIN3A-202ENST00000394947 LMCD1Q9NZU5 365 aa13.35□□□□□ -0.27
SIN3A-202ENST00000394947 GOLGA8KD6RF30 607 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 LMNB1P20700 586 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 RFX8Q6ZV50 586 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 EEPD1Q7L9B9 569 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 DEPDC1BQ8WUY9 529 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 SNX21Q969T3 373 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 RPS6KC1Q96S38 1066 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 ART3Q13508 389 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 CDO1Q16878 200 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 SUPT20HQ8NEM7 779 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 NCLNQ969V3 563 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms