RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 DYNC1I2Q13409 638 aaKnown RBP13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 SETDB1Q15047 1291 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 CCNJLQ8IV13 435 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 ARFGAP2Q8N6H7 521 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 TEX9Q8N6V9 391 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 LBHD1Q9BQE6 289 aaPredicted RBP13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 TMBIM4Q9HC24 238 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 LRRC4CQ9HCJ2 640 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 HMG20BQ9P0W2 317 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 SPATA7Q9P0W8 599 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 SERTAD1Q9UHV2 236 aa13.83□□□□□ -0.2
SLC28A1-203ENST00000394573 TULP4Q9NRJ4 1543 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 KDM6AO15550 1401 aaPredicted RBP13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 MAP3K5Q99683 1374 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 H0Y3Z8 333 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 SUPT3HO75486 399 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 ALDH1L1O75891 902 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 ALADP13716 330 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 ETS2P15036 469 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 PDIA3P30101 505 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 NCALDP61601 193 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 GRIN1Q05586 938 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 TRIM7Q9C029 511 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 INCENPQ9NQS7 918 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 POLR2DO15514 142 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 CTNND1O60716 968 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 SERPINB4P48594 390 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 MAGOHP61326 146 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 KRT32Q14532 448 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 KBTBD12Q3ZCT8 623 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 MAGOHBQ96A72 148 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 KLHL29Q96CT2 875 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 GPATCH3Q96I76 525 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 MTFR1LQ9H019 292 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 ATXN10Q9UBB4 475 aa13.82□□□□□ -0.2
SLC28A1-203ENST00000394573 GSTT1P30711 240 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 RAD23BP54727 409 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 EMC10Q5UCC4 262 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 CC2D2BQ6DHV5 1058 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 NEURL4Q96JN8 1562 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 CCNFP41002 786 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 PPP2R2AP63151 447 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 KLC1Q07866 573 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 TRPM8Q7Z2W7 1104 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 SAPCD2Q86UD0 394 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 ANKS4BQ8N8V4 417 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 C17orf50Q8WW18 174 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 ABTB1Q969K4 478 aaPredicted RBP13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 DTNBP1Q96EV8 351 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 MLXIPQ9HAP2 919 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 CABP1Q9NZU7 370 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 CAPN6Q9Y6Q1 641 aa13.81□□□□□ -0.2
SLC28A1-203ENST00000394573 KIAA1210Q9ULL0 1709 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 SYNRGQ9UMZ2 1314 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 CFAP73A6NFT4 308 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 RARAP10276 462 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 RPL13P26373 211 aaKnown RBP13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 HLTFQ14527 1009 aaKnown RBP eCLIP13.8□□□□□ -0.28e-6■■■■□ 21.3
SLC28A1-203ENST00000394573 CEP128Q6ZU80 1094 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 TAX1BP1Q86VP1 789 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 CHMP6Q96FZ7 201 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 SUN2Q9UH99 717 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 SNX12Q9UMY4 172 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 CHMP2BQ9UQN3 213 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 KRT86O43790 486 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 MSH2P43246 934 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 PLCD1P51178 756 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 ATP11AP98196 1134 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 MDM2Q00987 491 aaPredicted RBP13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 CBX3Q13185 183 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 CUL4BQ13620 913 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 OLFML1Q6UWY5 402 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 P3H4Q92791 437 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 CCDC51Q96ER9 411 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.8□□□□□ -0.22e-6■■■■■ 27.7
SLC28A1-203ENST00000394573 MYO3AQ8NEV4 1616 aa13.8□□□□□ -0.2
SLC28A1-203ENST00000394573 ATP10BO94823 1461 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 ORC4O43929 436 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 HIP1RO75146 1068 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 AFMP43652 599 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 KIF23Q02241 960 aaPredicted RBP13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 MORC3Q14149 939 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 HLFQ16534 295 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 RESP18Q5W5W9 173 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 OR52E8Q6IFG1 317 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 LCA5Q86VQ0 697 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 IFT20Q8IY31 132 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 CASKIN2Q8WXE0 1202 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 TMOD4Q9NZQ9 345 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 PNMA3Q9UL41 463 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 ADGRB1O14514 1584 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 TTC26A0AVF1 554 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms