RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 CCNT1O60563 726 aaKnown RBP16.98■□□□□ 0.31
CCT4-201ENST00000394440 YBX3P16989 372 aaKnown RBP eCLIP16.98■□□□□ 0.312e-15■■□□□ 13.6
CCT4-201ENST00000394440 MRPL12P52815 198 aaKnown RBP16.98■□□□□ 0.31
CCT4-201ENST00000394440 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
CCT4-201ENST00000394440 UBE2SQ16763 222 aa16.98■□□□□ 0.31
CCT4-201ENST00000394440 DTHD1Q6ZMT9 781 aa16.98■□□□□ 0.31
CCT4-201ENST00000394440 SPICE1Q8N0Z3 855 aa16.98■□□□□ 0.31
CCT4-201ENST00000394440 GLT8D2Q9H1C3 349 aa16.98■□□□□ 0.31
CCT4-201ENST00000394440 PCDHA1Q9Y5I3 950 aa16.98■□□□□ 0.31
CCT4-201ENST00000394440 NEMFO60524 1076 aa16.97■□□□□ 0.31
CCT4-201ENST00000394440 OR52Z1P0C646 297 aa16.97■□□□□ 0.31
CCT4-201ENST00000394440 PYM1Q9BRP8 204 aaKnown RBP16.97■□□□□ 0.31
CCT4-201ENST00000394440 AMNQ9BXJ7 453 aa16.97■□□□□ 0.31
CCT4-201ENST00000394440 PSTPIP2Q9H939 334 aa16.97■□□□□ 0.31
CCT4-201ENST00000394440 LMNB1P20700 586 aa16.97■□□□□ 0.31
CCT4-201ENST00000394440 GRAMD1CQ8IYS0 662 aa16.97■□□□□ 0.31
CCT4-201ENST00000394440 PRR12Q9ULL5 1215 aa16.97■□□□□ 0.31
CCT4-201ENST00000394440 GRIN3BO60391 1043 aa16.96■□□□□ 0.31
CCT4-201ENST00000394440 BMP6P22004 513 aa16.96■□□□□ 0.31
CCT4-201ENST00000394440 STAT2P52630 851 aa16.96■□□□□ 0.31
CCT4-201ENST00000394440 SARM1Q6SZW1 724 aa16.96■□□□□ 0.31
CCT4-201ENST00000394440 GLIS2Q9BZE0 524 aaPredicted RBP16.96■□□□□ 0.31
CCT4-201ENST00000394440 SH2D4AQ9H788 454 aa16.96■□□□□ 0.31
CCT4-201ENST00000394440 PLA2G6O60733 806 aa16.96■□□□□ 0.3
CCT4-201ENST00000394440 PDXDC2PQ6P474 469 aa16.96■□□□□ 0.3
CCT4-201ENST00000394440 AOPEPQ8N6M6 819 aa16.96■□□□□ 0.3
CCT4-201ENST00000394440 PAGE5Q96GU1 130 aa16.96■□□□□ 0.3
CCT4-201ENST00000394440 CCSER1Q9C0I3 900 aa16.96■□□□□ 0.3
CCT4-201ENST00000394440 DEFB129Q9H1M3 183 aa16.96■□□□□ 0.3
CCT4-201ENST00000394440 MAN1B1Q9UKM7 699 aa16.96■□□□□ 0.3
CCT4-201ENST00000394440 GOLGA6L19H0YKK7 550 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 FAM83BQ5T0W9 1011 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 FBXO11Q86XK2 927 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 GPC2Q8N158 579 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 IQUBQ8NA54 791 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 MTMR9Q96QG7 549 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 GINM1Q9NU53 330 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 GPRC5DQ9NZD1 345 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 BECN2A8MW95 431 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 MEIS2O14770 477 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 PLCB2Q00722 1185 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 IKQ13123 557 aaPredicted RBP16.95■□□□□ 0.3
CCT4-201ENST00000394440 PPP4R3AQ6IN85 833 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 PLA2G4DQ86XP0 818 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 TRIML1Q8N9V2 468 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 CCDC34Q96HJ3 373 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 AK8Q96MA6 479 aa16.95■□□□□ 0.3
CCT4-201ENST00000394440 POLR2AP24928 1970 aaKnown RBP16.94■□□□□ 0.3
CCT4-201ENST00000394440 H7C1D1 291 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 TDP2O95551 362 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 CDC25AP30304 524 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 SNAP25P60880 206 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 MORC3Q14149 939 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 NCAPHQ15003 741 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 ISM2Q6H9L7 571 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 ARHGAP27Q6ZUM4 889 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 CCDC84Q86UT8 332 aaPredicted RBP16.94■□□□□ 0.3
CCT4-201ENST00000394440 SMARCE1Q969G3 411 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 PARP14Q460N5 1801 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L15C9J2P7 530 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L13C9JLJ4 530 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L11C9JVI0 530 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L18D6R9N7 530 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L22D6RA61 530 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L17D6RBQ6 530 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L19D6RCP7 530 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L20D6RJB6 530 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 SLC37A4O43826 429 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 TXLNAP40222 546 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L24Q0WX57 530 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 DPYDQ12882 1025 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 TRPM4Q8TD43 1214 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 DISC1Q9NRI5 854 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
CCT4-201ENST00000394440 PHIPQ8WWQ0 1821 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 PP2D1A8MPX8 630 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 OPLAHO14841 1288 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 IKBKBO14920 756 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 AP3B2Q13367 1082 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 FAM43AQ8N2R8 423 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 IGSF22Q8N9C0 903 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 CRYGNQ8WXF5 182 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 MTRQ99707 1265 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 RANBP17Q9H2T7 1088 aaKnown RBP16.93■□□□□ 0.3
CCT4-201ENST00000394440 ESPNB1AK53 854 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
CCT4-201ENST00000394440 ZNF75DP51815 510 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 KARSQ15046 597 aaKnown RBP16.93■□□□□ 0.3
CCT4-201ENST00000394440 NAALADL2Q58DX5 795 aa16.93■□□□□ 0.3
CCT4-201ENST00000394440 NBPF12Q5TAG4 269 aaPredicted RBP16.93■□□□□ 0.3
CCT4-201ENST00000394440 APOBEC3FQ8IUX4 373 aaKnown RBP16.93■□□□□ 0.3
CCT4-201ENST00000394440 P2RX7Q99572 595 aaKnown RBP16.93■□□□□ 0.3
CCT4-201ENST00000394440 CHURC1Q8WUH1 139 aa16.92■□□□□ 0.3
CCT4-201ENST00000394440 ANO3Q9BYT9 981 aa16.92■□□□□ 0.3
CCT4-201ENST00000394440 GCFC2P16383 781 aaKnown RBP16.92■□□□□ 0.3
CCT4-201ENST00000394440 AFMP43652 599 aa16.92■□□□□ 0.3
CCT4-201ENST00000394440 FXR2P51116 673 aaKnown RBP eCLIP16.92■□□□□ 0.34e-11■■■■□ 19.6
CCT4-201ENST00000394440 ZYXQ15942 572 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms